Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 199 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 46.2 bits (108), Expect = 3e-10
 Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 10/146 (6%)

Query: 37  FYRRRVRGADDDIEDMVQDTLIAVHTRRATYDPERAFTAWLYAVARYKMIDHFRRVGR-- 94
           FY  R+  +  D ED+V++  + +  ++  +       ++LY   +   +D  +   R  
Sbjct: 34  FYAERILQSKTDAEDVVENLFVKLWQKKMEFSSRDHLRSFLYKSTKNACLDFIKTAARSA 93

Query: 95  ------LRPIDDLADSLVADEFEASSIARLDINDLLEQLPPKQARMIRAIRLEGLSVAEA 148
                 L   +D   S + +   A  I   +I+  +E LP +   +IR   +EGLS+ E 
Sbjct: 94  ERNSHFLDTAEDYTKSHLTNMIRAEVIR--EIHQAIESLPAQCGTVIRKSYIEGLSLPEI 151

Query: 149 ASAEGIGESDVKVSVHRGLKALMARV 174
           A    +    VK    RGL  L  ++
Sbjct: 152 AQEMSLSVQTVKNHKLRGLAILRKKI 177