Pairwise Alignments

Query, 179 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 169 a.a., sigma-70 family RNA polymerase sigma factor from Bacteroides stercoris CC31F

 Score = 47.0 bits (110), Expect = 2e-10
 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 19/157 (12%)

Query: 30  LVPLLRGFYRRRVRGADD--DIEDMVQDTLIAVHTRRATYDPERAFTAWLYAVARYKMID 87
           ++PL    +R  +R   D  + ED+VQ+TLI V  +R  +    +  A+   VAR   ID
Sbjct: 10  ILPLKDKLFRLALRITSDRAEAEDVVQETLIRVWNKRDEWTQFGSVEAYCLTVARNLAID 69

Query: 88  HFRRVGRLRPIDDLADSLVADEFEASSIA----RLD-------INDLLEQLPPKQARMIR 136
              R       D  A  L  D  EAS  +    RL        I+ L+ +LP KQ  +++
Sbjct: 70  RSERK------DARAVELTPDMEEASEASGPYERLVNKERMALIHRLINELPEKQRLIMQ 123

Query: 137 AIRLEGLSVAEAASAEGIGESDVKVSVHRGLKALMAR 173
              +EG S  E A    + E  VKV++ R  + +  R
Sbjct: 124 LRDMEGKSYKEIAVVLSLTEEQVKVNLFRARQKVKQR 160