Pairwise Alignments
Query, 929 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2
Subject, 583 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23
Score = 355 bits (912), Expect = e-102
Identities = 220/584 (37%), Positives = 317/584 (54%), Gaps = 80/584 (13%)
Query: 13 IRIESLSHRYGGII--ALNEVSLSLPKGKTTALVGPDGVGKSTLLGLISGVKKLQTGRLS 70
IR+++L R+ G+ AL ++S + G T LVGPDG GK+TL+ +++G+ G +
Sbjct: 8 IRLDALEKRFDGMTKPALAQLSAEIRAGAVTGLVGPDGAGKTTLMRMLAGLLTPSAGAIR 67
Query: 71 VLGFD-LTERRKREEFLSRVAYMPQGLGRNLYPTLSVRENIDFFGRLFGLSAVEREAHMR 129
VLG D + + R+ +R+ YMPQ G LY L+V EN+ + L G++ R A
Sbjct: 68 VLGLDPIADDRQLH---ARLGYMPQKFG--LYEDLTVMENLTLYADLRGITGDIRRATFD 122
Query: 130 RLLDATGLAPFPDRPAGKLSGGMKQKLGLCCSLVHDPDLLILDEPTTGVDPLSRRQFWEL 189
RLL T L F R AGKLSGGMKQKLGL C+L+ P +L+LDEP GVDP+SRR+ W +
Sbjct: 123 RLLQFTDLTRFTTRLAGKLSGGMKQKLGLACTLLGQPGVLLLDEPGVGVDPISRRELWRM 182
Query: 190 VDAMCAERPDMTVLVSTAYMEEAERFGHLVAMDDGKVIAQGDTREI-MRDAGA------- 241
V + + M +L ST+Y++EAE+ ++ +++G+++ +G ++ R AG
Sbjct: 183 VHELADD--GMLILWSTSYLDEAEQCRDVLLLNEGELLYRGAPADLTQRMAGRCLLLDQP 240
Query: 242 -------------------DTLEAAYVRLL--------------------PQDKRP---- 258
++ YVRL+ QD P
Sbjct: 241 DSNHRRLLQQALRQPQVSDGVIQGRYVRLMLKPQADRAALLHTLGLPPDSVQDAAPRFED 300
Query: 259 -------------SGDALVVPAWQDKGEAPAIEAHDLTRRFGDFVAVDHVSFRIGRGEIF 305
S A ++P IEA +LT++FGDF A D V+F++ RGEIF
Sbjct: 301 AFIDLLGGGPSATSSLAAILPQLDTHRGETVIEARNLTKKFGDFAATDRVNFQVRRGEIF 360
Query: 306 GFLGSNGCGKTTTMKMLTGLLDATDGTASLFGRPIAPGDMETRMRVGYMSQAFSLYEELS 365
G LG NG GK+TT +M+ GLL TDG A + + R +GYM+Q FSLY L+
Sbjct: 361 GLLGPNGAGKSTTFRMMCGLLTPTDGQALVLDMDLKTRSGRARQHLGYMAQKFSLYGNLT 420
Query: 366 VRQNLVLHARLYRVPRQQAGELVSAALAQFELEAHADAVPAALPLGIRQRLQLAAACLHR 425
V QNL + +Y + Q + V + F P ALP G RQRL LA A +H
Sbjct: 421 VEQNLRFFSGVYGLRGQHQQDKVDSMAQAFNFRPIFQQTPDALPFGFRQRLALACALMHE 480
Query: 426 PEILILDEPTSGVDPAARDMFWRHLIRLSRDEGVTIFVSTHFMNEAERCDRISLMHRGRV 485
P+IL LDEPTSGVDP R FW+H+ + D+GVT+ V+THFM+EAE CDRI L++RGR+
Sbjct: 481 PDILFLDEPTSGVDPFTRREFWQHINGMV-DKGVTVMVTTHFMDEAEYCDRIGLVYRGRL 539
Query: 486 LTVGAPTELTQRYDAQ-----RLEDAFIAVLEKDNDEAPTASAH 524
+ G P +L ++ + +E AFIA+++ + EA A+AH
Sbjct: 540 IASGTPDDLKRQAASDDTPEPTMEQAFIALVQAYDQEAEHAAAH 583
Score = 143 bits (360), Expect = 4e-38
Identities = 81/248 (32%), Positives = 137/248 (55%), Gaps = 11/248 (4%)
Query: 10 EEAIRIESLSHRYGGIIALNEVSLSLPKGKTTALVGPDGVGKSTLLGLISGVKKLQTGRL 69
E I +L+ ++G A + V+ + +G+ L+GP+G GKST ++ G+ G+
Sbjct: 329 ETVIEARNLTKKFGDFAATDRVNFQVRRGEIFGLLGPNGAGKSTTFRMMCGLLTPTDGQA 388
Query: 70 SVLGFDLTERRKREEFLSRVAYMPQGLGRNLYPTLSVRENIDFFGRLFGLSAVEREAHMR 129
VL DL R R + YM Q +LY L+V +N+ FF ++GL ++ +
Sbjct: 389 LVLDMDLKTRSGRAR--QHLGYMAQKF--SLYGNLTVEQNLRFFSGVYGLRGQHQQDKVD 444
Query: 130 RLLDATGLAPFPDRPAGKLSGGMKQKLGLCCSLVHDPDLLILDEPTTGVDPLSRRQFWEL 189
+ A P + L G +Q+L L C+L+H+PD+L LDEPT+GVDP +RR+FW+
Sbjct: 445 SMAQAFNFRPIFQQTPDALPFGFRQRLALACALMHEPDILFLDEPTSGVDPFTRREFWQH 504
Query: 190 VDAMCAERPDMTVLVSTAYMEEAERFGHLVAMDDGKVIAQGDTREIMRDAGAD-----TL 244
++ M + +TV+V+T +M+EAE + + G++IA G ++ R A +D T+
Sbjct: 505 INGMVDK--GVTVMVTTHFMDEAEYCDRIGLVYRGRLIASGTPDDLKRQAASDDTPEPTM 562
Query: 245 EAAYVRLL 252
E A++ L+
Sbjct: 563 EQAFIALV 570
Score = 139 bits (349), Expect = 7e-37
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 3/227 (1%)
Query: 273 EAPAIEAHDLTRRFGDFV--AVDHVSFRIGRGEIFGFLGSNGCGKTTTMKMLTGLLDATD 330
+ P I L +RF A+ +S I G + G +G +G GKTT M+ML GLL +
Sbjct: 4 DPPLIRLDALEKRFDGMTKPALAQLSAEIRAGAVTGLVGPDGAGKTTLMRMLAGLLTPSA 63
Query: 331 GTASLFGRPIAPGDMETRMRVGYMSQAFSLYEELSVRQNLVLHARLYRVPRQQAGELVSA 390
G + G D + R+GYM Q F LYE+L+V +NL L+A L +
Sbjct: 64 GAIRVLGLDPIADDRQLHARLGYMPQKFGLYEDLTVMENLTLYADLRGITGDIRRATFDR 123
Query: 391 ALAQFELEAHADAVPAALPLGIRQRLQLAAACLHRPEILILDEPTSGVDPAARDMFWRHL 450
L +L + L G++Q+L LA L +P +L+LDEP GVDP +R WR +
Sbjct: 124 LLQFTDLTRFTTRLAGKLSGGMKQKLGLACTLLGQPGVLLLDEPGVGVDPISRRELWRMV 183
Query: 451 IRLSRDEGVTIFVSTHFMNEAERCDRISLMHRGRVLTVGAPTELTQR 497
L+ D+G+ I ST +++EAE+C + L++ G +L GAP +LTQR
Sbjct: 184 HELA-DDGMLILWSTSYLDEAEQCRDVLLLNEGELLYRGAPADLTQR 229