Pairwise Alignments

Query, 929 a.a., Ribosome-associated ATPase RbbA from Sphingobium sp. HT1-2

Subject, 911 a.a., ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein from Escherichia coli BL21

 Score =  892 bits (2305), Expect = 0.0
 Identities = 468/921 (50%), Positives = 626/921 (67%), Gaps = 30/921 (3%)

Query: 14  RIESLSHRYGGIIALNEVSLSLPKGKTTALVGPDGVGKSTLLGLISGVKKLQTGRLSVLG 73
           ++  +S  YG  +ALN ++L +P      L+GPDGVGKS+LL LISG + ++ G + VLG
Sbjct: 14  QLAGVSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLG 73

Query: 74  FDLTERRKREEFLSRVAYMPQGLGRNLYPTLSVRENIDFFGRLFGLSAVEREAHMRRLLD 133
            D+ + + R +   R+A+MPQGLG+NLY TLSV EN+DFF RLFG    ERE  +  LL 
Sbjct: 74  GDMRDPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLT 133

Query: 134 ATGLAPFPDRPAGKLSGGMKQKLGLCCSLVHDPDLLILDEPTTGVDPLSRRQFWELVDAM 193
           +TGLAPF DRPAGKLSGGMKQKLGLCC+L+HDP+LLILDEPTTGVDPLSR QFW+L+D++
Sbjct: 134 STGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSI 193

Query: 194 CAERPDMTVLVSTAYMEEAERFGHLVAMDDGKVIAQGDTREIMRDAGADTLEAAYVRLLP 253
              + +M+VLV+TAYMEEAERF  LVAM+ G+V+A G   E+ +   + TLE A++ LLP
Sbjct: 194 RQRQSNMSVLVATAYMEEAERFDWLVAMNAGEVLATGSAEELRQQTQSATLEEAFINLLP 253

Query: 254 QDKRPSGDALVVPAWQDKGEAPAIEAHDLTRRFGDFVAVDHVSFRIGRGEIFGFLGSNGC 313
           Q +R +  A+V+P +Q +    AIEA DLT RFG FVAVDHV+FRI RGEIFGFLGSNGC
Sbjct: 254 QAQRQAHQAVVIPPYQPENAEIAIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGC 313

Query: 314 GKTTTMKMLTGLLDATDGTASLFGRPIAPGDMETRMRVGYMSQAFSLYEELSVRQNLVLH 373
           GK+TTMKMLTGLL A++G A LFG+P+ P D++TR RVGYMSQAFSLY EL+VRQNL LH
Sbjct: 314 GKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELH 373

Query: 374 ARLYRVPRQQAGELVSAALAQFELEAHADAVPAALPLGIRQRLQLAAACLHRPEILILDE 433
           ARL+ +P  +    V+    +F+L    D +P +LPLGIRQRL LA A +HRPE+LILDE
Sbjct: 374 ARLFHIPEAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDE 433

Query: 434 PTSGVDPAARDMFWRHLIRLSRDEGVTIFVSTHFMNEAERCDRISLMHRGRVLTVGAPTE 493
           PTSGVDP ARDMFW+ ++ LSR + VTIF+STHFMNEAERCDRISLMH G+VL  G P E
Sbjct: 434 PTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQE 493

Query: 494 LTQRYDAQRLEDAFIAVLEKDNDEAPTASAHLPVDASVASSTPAAGARSTAPGRPRL-PT 552
           L ++  A  LE+AFIA L++                       AAG  + A   P +  T
Sbjct: 494 LVEKRGAASLEEAFIAYLQE-----------------------AAGQSNEAEAPPVVHDT 530

Query: 553 AAGSWPGFA----WAFARREATELMRDRIRLAFALIGPIILLCIAAYSISFDVQNIRLAV 608
                 GF+    ++++RREA EL RD +R   AL+G +IL+ I  Y IS DV+N+R AV
Sbjct: 531 THAPRQGFSLRRLFSYSRREALELRRDPVRSTLALMGTVILMLIMGYGISMDVENLRFAV 590

Query: 609 LDHDRSAASRDLQLYFEGSRYFRVEPELASDAAADQALREASTKMVLDIPPGFGRDLTAG 668
           LD D++ +S+   L   GSRYF  +P L S    D+ +R     + ++IPP FGRD+  G
Sbjct: 591 LDRDQTVSSQAWTLNLSGSRYFIEQPPLTSYDELDRRMRAGDITVAIEIPPNFGRDIARG 650

Query: 669 RRPAVDVRIDGASPFPASNARAYAEAVLLRYAMD-QLRSAQPFAVPDLSSTIEPRFIYNQ 727
               + V IDGA P  A   + Y +A+   +  D   R + P +   L + IE R+ YN 
Sbjct: 651 TPVELGVWIDGAMPSRAETVKGYVQAMHQSWLQDVASRQSTPASQSGLMN-IETRYRYNP 709

Query: 728 EFRSIYAMAPGVLMLCMILIPAMLTALGVVREKEIGSITNLYASPASLGAFLVGKQMPYA 787
           + +S+ A+ P V+ L +++IP+ML+AL VVREKE+GSI NLY +P +   FL+GKQ+PY 
Sbjct: 710 DVKSLPAIVPAVIPLLLMMIPSMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYI 769

Query: 788 LLAMISFVTLILVTVFILGVPLKGSLPALLIGGFLFILSVTGLGLMISAFVRSQVAAIFA 847
            L M++F  L  ++VF+ GVP KGS   L +   L+I+  TG+GL+IS F++SQ+AAIF 
Sbjct: 770 ALGMLNFFLLCGLSVFVFGVPHKGSFLTLTLAALLYIIIATGMGLLISTFMKSQIAAIFG 829

Query: 848 TSLICLIPSVNFSGLLYPVSTLTGPSHIIGLTFPSSWFQIVSLGTFTKGLGMASFGQAYL 907
           T++I LIP+  FSG++ PV++L GP   IG  +P+S F  ++ GTF+K L +    Q ++
Sbjct: 830 TAIITLIPATQFSGMIDPVASLEGPGRWIGEVYPTSHFLTIARGTFSKALDLTDLWQLFI 889

Query: 908 ALMALAFLFVGGARLMLGKQE 928
            L+    L +G + L+L KQE
Sbjct: 890 PLLIAIPLVMGLSILLLKKQE 910



 Score =  151 bits (382), Expect = 2e-40
 Identities = 92/278 (33%), Positives = 151/278 (54%), Gaps = 10/278 (3%)

Query: 1   MIPPAQILPEEA---IRIESLSHRYGGIIALNEVSLSLPKGKTTALVGPDGVGKSTLLGL 57
           +IPP Q  PE A   I    L+ R+G  +A++ V+  +P+G+    +G +G GKST + +
Sbjct: 264 VIPPYQ--PENAEIAIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKM 321

Query: 58  ISGVKKLQTGRLSVLGFDLTERRKREEFLSRVAYMPQGLGRNLYPTLSVRENIDFFGRLF 117
           ++G+     G   + G  +    K  +   RV YM Q    +LY  L+VR+N++   RLF
Sbjct: 322 LTGLLPASEGEAWLFGQPVDP--KDIDTRRRVGYMSQAF--SLYNELTVRQNLELHARLF 377

Query: 118 GLSAVEREAHMRRLLDATGLAPFPDRPAGKLSGGMKQKLGLCCSLVHDPDLLILDEPTTG 177
            +   E  A +  + +   L    D     L  G++Q+L L  +++H P++LILDEPT+G
Sbjct: 378 HIPEAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSG 437

Query: 178 VDPLSRRQFWELVDAMCAERPDMTVLVSTAYMEEAERFGHLVAMDDGKVIAQGDTREIMR 237
           VDP++R  FW+L+  + + +  +T+ +ST +M EAER   +  M  GKV+A G  +E++ 
Sbjct: 438 VDPVARDMFWQLMVDL-SRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVE 496

Query: 238 DAGADTLEAAYVRLLPQDKRPSGDALVVPAWQDKGEAP 275
             GA +LE A++  L +    S +A   P   D   AP
Sbjct: 497 KRGAASLEEAFIAYLQEAAGQSNEAEAPPVVHDTTHAP 534