Pairwise Alignments

Query, 468 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 481 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  160 bits (405), Expect = 9e-44
 Identities = 128/468 (27%), Positives = 206/468 (44%), Gaps = 24/468 (5%)

Query: 14  LTACASVPNTPA-HAPRITPPNRLDAAAANDAAITGT--DRWWTAWGDPALDALVEKSLE 70
           L+AC   P+      P++T  +      A   A+     +RWW  + D  L AL  ++L 
Sbjct: 14  LSACTVGPDFQRPQGPQVTQWSEPQGRQAASRAVNDPLQERWWDVFHDEQLSALTRRALT 73

Query: 71  ANADIRAAKAHVAAARALVTVAESALYPTVAANGTAWASQ-SDAGIDDKWQAMLPSLSGN 129
            N D++ A + +  +RA+  V  +  YP V ANG     + S  G+ D         SGN
Sbjct: 74  DNLDLKLASSRLQQSRAVRQVTTAERYPNVNANGDYQRKRNSGKGLSDP--------SGN 125

Query: 130 SGSGYL----VGLGATWEADLFGGRHADAEMARALSESTARTADGVRLMVAADVVENYQQ 185
           +G        +G  A+WE D +G    + E A A  +        V L V A+  +NY Q
Sbjct: 126 NGRSAFNQWDMGFSASWELDFWGRVKRETEAADATLQVAENDRRAVLLSVLAETAQNYIQ 185

Query: 186 LQGLRRRLDVLDRSEATASRLVDYAAARQRTGAATAADVTRARNGLEALRASRPALTSLV 245
           L+G++    V +++   A   +  +  R   G AT  DV  A   + A+ A  P L    
Sbjct: 186 LRGVQNTRAVTEQNLDVARHSLKLSQLRLADGVATDLDVAEAAAQVAAIEARLPDLQQRQ 245

Query: 246 DARKRRLAVLAGDVPEQAPDMVA--SATFETPDAPTGQLPSDILDRRPDVAARSWLVNAR 303
           D     L++L G+ P+     ++  +A  +T       LPS++ +RRPD+      ++A 
Sbjct: 246 DQLINALSLLMGEPPQALHAQLSKDAAVPQTQRQVAIGLPSELAERRPDIRQAEARLHAA 305

Query: 304 AARLKSLKADLLPRFAIHFLGQNGHIELGGLPGYGGTGGLVGLSASMPLFNAGRLQASVK 363
            A +   K D  PR  +     +  ++L     +G      G   S+PLFN GRLQ  + 
Sbjct: 306 TASIGVAKGDFYPRITLSGSLGSQAMQLSDFGSWGSRAFAFGPQFSLPLFNGGRLQGMLN 365

Query: 364 AGDAELEAALANYDQAMLSALEEVE---SAYGFRAGLDERLAGLIRTSDMARRRADQLAI 420
             +A+ + A   Y Q +L A  E++   + Y       + LA  +R + +A R A Q   
Sbjct: 366 LREAQQQEAALAYQQTVLRAWHEIDDQLTRYNASQLRRDSLAEAVRQNQIALRTAQQ--- 422

Query: 421 LYDAGRTQLGDVLQARLDALSDEDKMEQTRIAQGTATVQLYRALGGGW 468
            Y  G     +VL  +   L+ +++   +      A V LY+ALGGGW
Sbjct: 423 QYVEGVVDFVNVLTVQSALLATQEQWVDSSTGVSLAMVGLYKALGGGW 470