Pairwise Alignments

Query, 468 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 471 a.a., Multidrug efflux RND outer membrane protein OprN from Pseudomonas putida KT2440

 Score =  174 bits (440), Expect = 7e-48
 Identities = 147/476 (30%), Positives = 221/476 (46%), Gaps = 32/476 (6%)

Query: 5   LLPPSLALLLTACASVPNTPAHAPRITPPNRLDAAAANDAAITGTDR------WWTAWGD 58
           L P  LAL L ACA  P+  A A   T P +L    ++D      DR      WW  + D
Sbjct: 7   LTPSLLALALAACAVGPDYQAPA---TEPAQL----SSDVQAKAYDRSRFESLWWKQFDD 59

Query: 59  PALDALVEKSLEANADIRAAKAHVAAARALVTVAESALYPTVAANGTAWASQSDAGIDDK 118
           P L+ LV+ SL+ N D+R A A + +AR++   AE+  +P V +  +     SD G   K
Sbjct: 60  PVLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRAS-----SDLG---K 111

Query: 119 WQAMLPSLSGNSGSGYLVGLGATWEADLFGGRHADAEMARALSESTARTADGVRLMVAAD 178
            Q    +    +   Y +GL   WE DLFG      E + A     A     +++ + A+
Sbjct: 112 GQIPGQTTERVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAE 171

Query: 179 VVENYQQLQG--LRRRLDVLDRSEATASRLVDYAAARQRTGAATAADVTRARNGLEALRA 236
           +V+ Y QL+G  LR ++ + +      SR +      +  G     DV RA   L  + A
Sbjct: 172 LVDAYGQLRGAQLREKIALANLKTQQESRTI--TETLRDAGVGNDLDVVRADARLAGVEA 229

Query: 237 SRPALTSLVDARKRRLAVLAGDVPEQ-APDMVASATFETPDA-PTGQLPSDILDRRPDVA 294
           + P L +     + R+A L G  P+  + D+   A      A P G  P ++L RRPD+ 
Sbjct: 230 TVPQLQAEQARARHRIATLLGQRPDALSVDLSPKALPAIAKALPVGD-PGELLRRRPDIR 288

Query: 295 ARSWLVNARAARLKSLKADLLPRFAIH-FLGQNGHIELGGLPGYGGTGG-LVGLSASMPL 352
           +    + A  A +    ADL PR ++  FLG       G   G        +G S +   
Sbjct: 289 SAERQLAAATANVGVATADLFPRVSLSGFLGFTA--ARGSQIGSSAANAWALGPSITWAA 346

Query: 353 FNAGRLQASVKAGDAELEAALANYDQAMLSALEEVESAYGFRAGLDERLAGLIRTSDMAR 412
           F+ G ++A ++   A+ E ALANY+Q +L ALEE  +A+       +RL  L+R SD +R
Sbjct: 347 FDLGSVRARLRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASR 406

Query: 413 RRADQLAILYDAGRTQLGDVLQARLDALSDEDKMEQTRIAQGTATVQLYRALGGGW 468
           + A+  +I Y  G      +L A  + LS ED   Q  +      V +Y+ALGGGW
Sbjct: 407 KAAELASIRYREGTVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGW 462