Pairwise Alignments

Query, 468 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  143 bits (360), Expect = 1e-38
 Identities = 127/475 (26%), Positives = 205/475 (43%), Gaps = 37/475 (7%)

Query: 11  ALLLTACASVPN--TPA--------HAPRITPPNRLDAAAANDAAITGTDRWWTAWGDPA 60
           A +L  C+ +P+  TP           P  +P    D AAA          W   + DPA
Sbjct: 12  AFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQG-------WRQFFHDPA 64

Query: 61  LDALVEKSLEANADIRAAKAHVAAARALVTVAESALYPTVAANGTAWASQSDAGIDDKWQ 120
           L  L++ SL  N D+R A  ++ A RA   +  + L+P V+A G+    +  A +     
Sbjct: 65  LQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANM----- 119

Query: 121 AMLPSLSGNSG--SGYLVGLG-ATWEADLFGGRHADAEMARALSESTARTADGVRLMVAA 177
               S +G SG  S Y   LG + +E DLFG   +  E A     S+ +     ++ + A
Sbjct: 120 ----SQTGESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVA 175

Query: 178 DVVENYQQLQGLRRRLDVLDRSEATASRLVDYAAARQRTGAATAADVTRARNGLEALRAS 237
            V   Y   Q  +    + + +  T     +        G A+A DV++AR  +E  R  
Sbjct: 176 SVANAYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVK 235

Query: 238 RPALTSLVDARKRRLAVLAG-DVPEQAPDMVASATFETPDAPTGQLPSDILDRRPDVAAR 296
                 LV      L VL G  +P      +     +  + P G LPSDIL RRPD+   
Sbjct: 236 YSQYQRLVAQDVNSLTVLLGTGIPADLAKPLELDADQLAEVPAG-LPSDILQRRPDIQEA 294

Query: 297 SWLVNARAARLKSLKADLLPRFAIHFLGQNGHIELGGLPGYGGTGGLVGLSASMPLFNAG 356
             L+ A  A + + +A   P  ++     +   ++G L   G    L     ++P+FNAG
Sbjct: 295 EHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAG 354

Query: 357 RLQASVKAGDAELEAALANYDQAMLSALEEVESAYGFRAGLDERLAG---LIRTSDMARR 413
            L+AS+     + +  +A Y++ + +A +EV      R   +E+L     L++ +    R
Sbjct: 355 SLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYR 414

Query: 414 RADQLAILYDAGRTQLGDVLQARLDALSDEDKMEQTRIAQGTATVQLYRALGGGW 468
            A++    Y  G       L A+ +  S +  +   R++Q T+ V LY+ALGGGW
Sbjct: 415 LAER---RYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466