Pairwise Alignments

Query, 188 a.a., sigma-24 (FecI-like) protein from Sphingobium sp. HT1-2

Subject, 196 a.a., RNA polymerase sigma factor SigX from Pseudomonas simiae WCS417

 Score = 54.3 bits (129), Expect = 1e-12
 Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 17/184 (9%)

Query: 7   DCSDGELAALA---LGGRQAAYGELVRRHQGWVHRLVRSHVGSPDEALDVTQASFVAAFS 63
           + SD EL A +   L     AY EL+RR+Q  +  +   ++G+  +A DV Q   +    
Sbjct: 15  ELSDEELVARSHTELFHVTRAYEELMRRYQRTLFNVCSRYLGNDRDADDVCQEVMLKVLY 74

Query: 64  ALSRYDGTRPFPVWMSRIVINKC----HDWRRRRAVRNFFSFALPLGEAEHIVDDAPSAD 119
            L  ++G   F  W+  I  N+C       RR+R + +  S   PL EA      AP   
Sbjct: 75  GLKNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSLD-PLEEASEEKAPAPEEK 133

Query: 120 RALDAEQQLAEAMTAIAALPASLKDTLILRTIDEKSEAETAEILGISQKAVETRLYRARA 179
             LD        +          ++ L+LR + E    E A+I+ +   A + R  RA  
Sbjct: 134 GGLDRWLVYVNPID---------REILVLRFVAELEFQEIADIMHMGLSATKMRYKRALD 184

Query: 180 RLAE 183
           +L E
Sbjct: 185 KLRE 188