Pairwise Alignments

Query, 188 a.a., sigma-24 (FecI-like) protein from Sphingobium sp. HT1-2

Subject, 196 a.a., RNA polymerase sigma factor SigX from Pseudomonas putida KT2440

 Score = 54.3 bits (129), Expect = 1e-12
 Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 6/160 (3%)

Query: 24  AYGELVRRHQGWVHRLVRSHVGSPDEALDVTQASFVAAFSALSRYDGTRPFPVWMSRIVI 83
           AY EL+RR+Q  +  +   ++G+  +A DV Q   +     L  ++G   F  W+  I  
Sbjct: 35  AYEELMRRYQRTLFNVCARYLGNDRDADDVCQEVMLKVLYGLKNFEGKSKFKTWLYSITY 94

Query: 84  NKCHDWRRRRAVRNFFSFALPLGEAEHIVDDAPSADRALDAEQQLAEAMTAIAALPASLK 143
           N+C    R+   +     AL L   E       S D+A   E++       +   P   +
Sbjct: 95  NECITQYRKERRKRRLMDALSLDPVEE-----ASEDKAPKPEEKGGLDKWLVHVNPID-R 148

Query: 144 DTLILRTIDEKSEAETAEILGISQKAVETRLYRARARLAE 183
           + L+LR + E    E A+I+ +   A + R  RA  +L E
Sbjct: 149 EILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDKLRE 188