Pairwise Alignments

Query, 188 a.a., sigma-24 (FecI-like) protein from Sphingobium sp. HT1-2

Subject, 178 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 54.7 bits (130), Expect = 9e-13
 Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 6/152 (3%)

Query: 27  ELVRRHQGWVHRLVRSHVGSPDEALDVTQASFVAAFSALSRYDGTRPFPVWMSRIVINKC 86
           EL R H GW+ + ++  +G+  +A ++ Q  FV   S    ++       ++ R+  N C
Sbjct: 16  ELYRSHHGWIRQWLQRKLGNAHDAAELAQDVFVRLLSKPRVFNDHEHARAYLGRMSRNAC 75

Query: 87  HD-WRRRRAVRNFFSFALPLGEAEHIVDDAPSADRALDAEQQLAEAMTAIAALPASLKDT 145
            D WRRRR  + +    +   + E +   APS +      + L +       +P  + + 
Sbjct: 76  VDFWRRRRVEQAYLE--VLAAQPEQL---APSLEHQAVILETLEQLQAMFERMPQRVAEA 130

Query: 146 LILRTIDEKSEAETAEILGISQKAVETRLYRA 177
             +  +    + E AE LG+S+++V + L +A
Sbjct: 131 FSMAQLQGMKQREIAEQLGVSERSVNSYLAQA 162