Pairwise Alignments

Query, 294 a.a., Ku domain protein from Sphingobium sp. HT1-2

Subject, 273 a.a., non-homologous end joining protein from Pseudomonas putida KT2440

 Score =  152 bits (383), Expect = 1e-41
 Identities = 89/265 (33%), Positives = 151/265 (56%), Gaps = 11/265 (4%)

Query: 3   ARAYWQGQLKLALVSIPVEVYPATKSGAAVSFRQIHEPTGKPIRYEKVVNGVGP-VDRDE 61
           ARA W+G +   LV IPV +  A ++   V F  + + + +P+ Y++V    G  +D+D 
Sbjct: 2   ARAIWKGAISFGLVHIPVALNTAVRT-ERVDFDWLDKRSMEPVGYKRVNKVTGKEIDKDN 60

Query: 62  ILKGFELSKGNYVLLEQEEIEAVKIESRKTLDLVQFVEADAIDVLYYEKPYFVIPADDLA 121
           I+KG E  KG YV++ +EEI   + E+ +T+D+  FVEA  I + +++ PY++ P D   
Sbjct: 61  IVKGVEFEKGRYVVISEEEIRKARPETTQTIDIFSFVEAGDIPLQHFDTPYYLTP-DRRG 119

Query: 122 EEAYAVLRDALRKAKKVGLGQLSVRGREQLVSIKPCGRGLVMEVLRYADEVTKAQTYFRG 181
            + YA+LR+ L K  KV L  + +  R+ L  ++P    LVM  LR+ +EV   +T    
Sbjct: 120 GKVYALLRETLEKTGKVALATVVLHTRQHLALLRPLDHALVMITLRWPEEVRGLETL--E 177

Query: 182 LPADTADDDM----LDLATSIIDKRTAPFRPEEFHDRYVDALHRLIEKKKKAKGK-RIIE 236
           L A   D  +    L++A  +++  + P++PE++HD +   +  L+E +K +KGK   +E
Sbjct: 178 LDASVTDSKVEKRELEMAKRLVEDMSGPWKPEDYHDAFRQTIMDLVE-EKASKGKIEAVE 236

Query: 237 EVDEEPARKGGNVIDLMAALKKSAG 261
           + D   A KG +++DL   LK+S G
Sbjct: 237 KGDTGAAEKGADILDLTELLKRSLG 261