Pairwise Alignments

Query, 840 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) / Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Sphingobium sp. HT1-2

Subject, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

 Score =  373 bits (958), Expect = e-107
 Identities = 186/499 (37%), Positives = 291/499 (58%), Gaps = 9/499 (1%)

Query: 25  PPRGIFLRWTDCNNNR-VGVWYVLTAFGFMLFAGVLALIMRTQLAVPDNDLVGPGTFNQL 83
           P +G+ +RW    N++ +G  Y+  +F   L  G  A+++R +L  P   +V P  FNQ+
Sbjct: 18  PAKGL-MRWVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPGLQIVEPAFFNQM 76

Query: 84  FTLHGSMMMFLFAVPMFEAVSIILLPQLLGARDLPFPRLSAFGYWSFLIGGLFVGGSIFF 143
            T+HG +M+F   +P F  ++  ++P ++GA D+  PR++ F +W      L +  ++F 
Sbjct: 77  TTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFS 136

Query: 144 -NAAPDGGWFMYPPLTTRTDLSGLGADIWMLGLSFIEVSSVAAAVELIVGVLKCRPPGMR 202
               P+ GW  Y PL+T    +      ++  +  + +SS+  A+ +I  +L  R PGM 
Sbjct: 137 PGGGPNFGWTFYAPLSTT--YAPASVTFFIFAIHLMGISSIMGAINVIATILNLRAPGMT 194

Query: 203 LNLMPLYAWYILVVAVMILFAFPPLIAGDILFEMERLLDWPFFDARRGGDPLLWQHLFWI 262
           L  MPL+ W  L+ A +++   P L     +  M+      FF A  GGDP+L+QH+FW 
Sbjct: 195 LMKMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWF 254

Query: 263 FGHPEVYIIFLPSIALFAMLVPTFANRHLLGYPWIVLAAVGTAFLSFGLWVHHMFTTGLP 322
           FGHPEVYI+ LP+    + ++P F+ + L GY  +V A    AFLSF +W HHMF  G+P
Sbjct: 255 FGHPEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIP 314

Query: 323 KISLAFFSAASEAVAIPTGVQIFVFIATLWAGRVTWSTPLLYATGSLAIFVIGGLTGVMV 382
            +   FF  A+  +A+PTGV++F +++T+W G +T+ TP+L+A   + +F IGG +G+M+
Sbjct: 315 VVGELFFMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLML 374

Query: 383 AVAPFDWQAHDSYFIVAHLHYVLIGGTLMPLFAGLYYYWPLVTGKKLSDRLGRVAFWMLF 442
           A+AP D+Q HD+YF+VAH HYVL+ G +  +FA  YY+ P  TG    + LG++ FW+ F
Sbjct: 375 AIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSF 434

Query: 443 VGANLTFFPMHLSGLMGMPRRVFTYPAELGLGGLNMASTLGAWLF-AAGVAVICVDLSLS 501
           VG N+ FFPMH  GL GMPRR+  Y   L     NM S++GA++F A  +  + + +   
Sbjct: 435 VGMNMAFFPMHFVGLAGMPRRIPDY--NLQFADFNMVSSIGAFMFGATQIFFLFIVIKCI 492

Query: 502 PRRVRAVRNPWN-AGTLEW 519
                A   PW+ A  LEW
Sbjct: 493 RGGAPAPAKPWDGAEGLEW 511