Pairwise Alignments

Query, 509 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 381 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  102 bits (254), Expect = 2e-26
 Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 37/287 (12%)

Query: 210 VCAL--GIPLSLMRSGPFDMLGNLLGFLVLANLTAVASCIGQAWRRGSSAAQSLGGAWAL 267
           VCAL    P+ L+R  P  +   L+  + +A+L  + + +    R G     + GG+   
Sbjct: 110 VCALLLAFPVWLVRKRPVALADRLM--VAIASLVVLETLV----RIGMLLVMTPGGS--- 160

Query: 268 PMTVLASTNFFDADAMFWGGGSQILVLFAAAWQTLWLSAAASRAHARLRMERDFARLAEA 327
              ++  + FF++D  F+       +  AA+     L+ +   +   + ++R        
Sbjct: 161 ---MIELSEFFESDYAFY-------MQLAASIFGFLLALSVLASQISVTVDRHL------ 204

Query: 328 KAHELARRDVLTGLPNRRGFTERAGGMLEGLPASGALVALLLIDVDWFKSINDVYGHEAG 387
                A  D LT + NRRGF  R        P  GA++A    D+D FK INDVYGH AG
Sbjct: 205 ---HAAEHDPLTDVLNRRGFDRRVPDFRNDTP-DGAIIAC---DIDHFKRINDVYGHAAG 257

Query: 388 DHVLAAIGRCIARHENSSCAVCRLGGEEFAMMITGAEIGNIEQFAKTLRRTLANLSHGDI 447
           D VL  +   + R+      V R GGEEF + + G       Q A  +R  L++L   + 
Sbjct: 258 DIVLIGLSDLLRRNAPDDALVARFGGEEFVVFLPGQTAAAAGQLANGMRTGLSSLDWRNR 317

Query: 448 IGNRMVTVSIGVTASASRVDFG--TLYRLADEALYDAKRGGRDQIAI 492
                +T S GV+A A R D       + AD++LY AKRGGRDQ+ +
Sbjct: 318 GVTSQITASFGVSAVA-RGDHSIHDAIKRADDSLYAAKRGGRDQVVL 363