Pairwise Alignments

Query, 400 a.a., Integrase-like protein from Sphingobium sp. HT1-2

Subject, 398 a.a., site-specific tyrosine recombinase XerC from Alteromonas macleodii MIT1002

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 170 DDLPGLRNRALLSVAYDTGLRASELVAVEVEHIVDAIDPEARLLTISRSKGDQEGKGATA 229
           D L  LR+ A++++ +D  LRA ELV V +E I          L +  SK DQ G+G   
Sbjct: 197 DSLLELRDLAIINLMFDALLRADELVRVCIEDI----SARNNTLLVVSSKSDQSGQGQYR 252

Query: 230 FLSPRSVRAIAAWTAAADIEEGPLFRRVQVRRYKARAAVKGRRIETISGRESWDLRKTLP 289
           ++S  ++  +  +   A+++      R+          V  RR+             T  
Sbjct: 253 YISSSTISMVQEYINEANLDPKTNATRLSSDLRGLHKGVLFRRL-------------TNH 299

Query: 290 KSAVPARTEYDVGEGA--LHPGSIGPIWRAMIRRAFDKGALSDLTADDLAQLLKGVSAHS 347
           K+A+    E      A  L+  S+  IW+ + +RA                + + ++ HS
Sbjct: 300 KTALLPFDENIPSHKANVLNYSSVYRIWQRIAQRA---------------GISENITPHS 344

Query: 348 TRVGLNQDLFASGEDLAGIMDALRWKSPRMPLAYNRNLAAEQGAAGRLIAK 398
            RVG    L   G  L  +  A  W+SP MP  Y +    ++G   +L AK
Sbjct: 345 GRVGGAVSLAEDGASLPELQLAGGWQSPEMPGHYTKQANVKRGGMAKLSAK 395