Pairwise Alignments

Query, 449 a.a., Outer membrane low permeability porin, OprB family from Sphingobium sp. HT1-2

Subject, 422 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

 Score =  162 bits (410), Expect = 2e-44
 Identities = 118/433 (27%), Positives = 196/433 (45%), Gaps = 37/433 (8%)

Query: 18  TAPVALAQDQAVADVDPPSVQSDAPAPW----QPLAAEGVTLSLSYTGEAATNVSGGLRR 73
           T  +ALA   A+A  D    +S     W      L  +GV ++  Y+GE A N  GGL R
Sbjct: 10  TLLLALASTTALAS-DDLMTRSTLTGDWGGLRHQLEEDGVKITGDYSGETAYNAHGGLHR 68

Query: 74  DATHAGQVYVGAELDLDRMIGID-GAMLHFAVTNRHGKNLSAMAIGNNTSVQEIYGTQNT 132
            A ++  V +G + DL ++ G+D G  +   + +R G + S   +GN   +QE YG   T
Sbjct: 69  SARYSQNVKLGVQFDLSKLYGLDNGGKVQLTINDRRGNSASEDLVGNRLPIQENYGGLYT 128

Query: 133 HLAILTWQQSFLDGRLDIEAGRSQA--NIHFLNSPLYCHFQTNSACGNPTFVFKNSNFTY 190
            L  L+++++     L+++ G      ++  L+S + C+F     CG+P  +   S +T 
Sbjct: 129 RLTELSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGHPLNMSGGSGWTN 188

Query: 191 FPASSWMAHAKLHVTPQVMLHAGVYEVSPDRKRASDHGFNFSTKNATGVIIPWELSFSRD 250
           +P +      K  ++P   L    + V P+    S   ++   K+ TG ++P EL +   
Sbjct: 189 YPNAHLGVRVKYDLSPAWQLRVAAFNVDPESNGNSSRAWHLGPKHTTGTVVPVELVYK-- 246

Query: 251 AADDRLPGHYILGGWFDRGDYADPLRDDQGGIAILTGRAAATRNGRSGLYARFDQQLTRP 310
                LPG Y LG ++D  D      DD+              +GR G Y   DQ +   
Sbjct: 247 -LQGELPGEYKLGYYYDSSDVKRIGSDDE-------------VSGRGGHYLLVDQAVWND 292

Query: 311 DPASPRGVSIFGVAMTNLSGQVEESRYLGMGIVQTGTFAGRDQDTI----GFAINDQRFS 366
             +  R +  FG    +       +++ G G+V    F GR +DT+    G A+ + R  
Sbjct: 293 QASPGRSLHAFGQYSASSKAASPFTKWYGAGVVLYKPFEGRPKDTVALGYGRAVPNPRSR 352

Query: 367 DLAIQRMNTARVAAGGR-ADIRRHQYMMELAYGLQVNPAIRLSPNLQYILHPDQTGAPDR 425
           D+    +  A   AG +  DI   + ++EL+YG Q  P + L P++QYI+ P      D 
Sbjct: 353 DV----LEDAAFNAGQQFPDIDSAEQLIELSYGYQATPWLNLRPDVQYIIEPGAFSGKD- 407

Query: 426 TRNIRNAFILGFK 438
              I NA ++G +
Sbjct: 408 ---IDNALVVGLQ 417