Pairwise Alignments

Query, 284 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 363 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  105 bits (263), Expect = 1e-27
 Identities = 80/248 (32%), Positives = 124/248 (50%), Gaps = 25/248 (10%)

Query: 44  IALAEFLLLLGATLVGTIMALMGIG------------ALLSPIHALADTLRPDSPEAPVL 91
           IAL    L+LG + V   M+++ +              +L+P +     + PD+ E  +L
Sbjct: 111 IALRPVWLVLGVSTVLYAMSVLPVRRWSFFCAMVITWVMLNPFYHTR--IEPDALEGAML 168

Query: 92  PE----VGDVIRTLYAGVHRAATSTRAQMDELQVAAHEDPLTGIANRRGLLAQIE-ELPV 146
                 +  ++   Y  + +A          L   A+ D LT I NRR  +AQ + +L +
Sbjct: 169 ISYAVFLSGLVSYSYLQIRKAKLHNFYLSKVLLEQAYVDALTDIPNRRSFMAQADRQLRM 228

Query: 147 EKRQGCIAIIDIDHFKQVNDRLGHDEGDRVLRDFATRLSAQIRRIDMVARWGGEEFAVFF 206
                 +A+IDID+FK+VNDR GHD GD VL+  A  +   +      AR GGEEFA+FF
Sbjct: 229 ATSGQYLAMIDIDNFKRVNDRFGHDVGDEVLKRVALHIKTSMAD-QAFARLGGEEFAIFF 287

Query: 207 QHCIEDEASWSLARLAEQIREHPLGDVDGRPITFSAGICRW-KGEEMDEVLRLADQALYE 265
           +   +  A   +A L +++RE    D    P+T S G+ +  +GE +   L  ADQALYE
Sbjct: 288 EGLDQQGAEQRVAALCQRVRE----DAGEHPVTISIGLAKVDRGESLTTALVRADQALYE 343

Query: 266 AKANGRNQ 273
           AK  G+++
Sbjct: 344 AKHTGKDR 351