Pairwise Alignments

Query, 941 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 658 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Sphingobium sp. HT1-2

 Score =  285 bits (730), Expect = 5e-81
 Identities = 228/670 (34%), Positives = 340/670 (50%), Gaps = 55/670 (8%)

Query: 285 RYRLAIGATSDVIWDWRFADGHVI-WNEALGTRFGHVQEQTSAQWWLDHIHPDDRA-RID 342
           R+ L + + +D         G V+ WN       G+  E+   Q +       DRA  + 
Sbjct: 17  RFELLVQSVTDYAIFMLDPAGFVVSWNSGAQRIKGYSAEEIIGQHFSAFYTEGDRAAHVP 76

Query: 343 ESIHAVIDHGGSNWTDEYRFRRADGSHAFVLDRGTVLRSDDGAPMRMIGAMLDLTERKAA 402
            ++    +  G    + +R R+ DG+  +       +R   G  +       DLTER+AA
Sbjct: 77  AAVLRTAEVEGRFEAEGWRLRK-DGTRFWANVVIDPIRDPAGHLLGFAKVTRDLTERRAA 135

Query: 403 EAALAASEERLRLATEAA-DIGLWDVDLVEDVLIWPARTKAMFGISPDVPVSMRDFYAGL 461
           +  L  SEER RL  ++  D  ++ +D V  +  W +  +   G S +  +     +A  
Sbjct: 136 QEELRRSEERFRLLVQSVTDYAIYMIDPVGTITSWNSGAERFKGYSAEEIMGQN--FARF 193

Query: 462 HPDDLDATTAAFAAAADPGQR-ALYDVEYRTVGKEDGIVRWVAAKGRGVFDDVR--CVRV 518
           + ++ D      + A D  QR   ++ E   + K DG   W +     V D +R     +
Sbjct: 194 YSEE-DRMAGLPSRALDTAQREGRFEAEGWRIRK-DGTRFWASV----VIDPIRDPAGEL 247

Query: 519 VGVAIDVTARKADEALLHELNERLELRVAQEVAERTKAEDALRQSQKMESVGQLTGGIAH 578
           +G A           +  +L ER +   A E     +A +A+ QSQKM+++G+LTGG+AH
Sbjct: 248 LGFA----------KITRDLTERRQAAQALE-----QAREAIFQSQKMDAIGKLTGGVAH 292

Query: 579 DFNNMLAVVVGSLDLLTRRL--GDDDPRARRYVDSAMDGARRAAQLTQRLLAFSRQQPLK 636
           DFNN+LAV+VGSLDL  +RL  G D     RY+D+AM  A R A LTQR+LAF+R+Q LK
Sbjct: 293 DFNNLLAVIVGSLDLARQRLAAGAD---ISRYLDNAMTAADRGATLTQRMLAFARKQELK 349

Query: 637 PESIDANKLVDGMSDMLRHTL-PDIQPETVLAGGLWRAFADPNQLENVILNLAVNARDAM 695
            E +D   L+ GM+D+L+ T+   +  ET     L  A ADP QLE  ++NLAVNARDAM
Sbjct: 350 LEQVDCIGLIHGMADLLKTTIGSSVAIETRFPLSLRPAHADPAQLELALINLAVNARDAM 409

Query: 696 AGGGKLIIETANCYLDSRYAEELIGVPAGEYVMIAVSDTGSGMPQEVVARAFDPFFTTKE 755
             GG+L+IE +   L      +L    AG ++ + V+D G GM +  +ARA +PFFTTK 
Sbjct: 410 PDGGRLLIEGSEITLALGDQPDLA---AGSFIRLTVTDEGEGMDEATLARAREPFFTTKG 466

Query: 756 VGRGTGLGLSQVYGFVKQSGGHVRIYSEVGEGTTVKVYLP-RLLGAVEEVAGVAMD---- 810
           VG+GTGLGLS ++GF +Q GG + I S+ G+GT+V ++LP  L  A  E   +  +    
Sbjct: 467 VGKGTGLGLSMIHGFTQQCGGAMTIASQPGKGTSVSIWLPVALTDASNERTAIPCEPDDL 526

Query: 811 ETLPRGESQELILLVEDEPGVRQFSFDALSELGYRVLEADGAAAALTLIDAHPEITLMFT 870
           ET P      +IL V+D+  V   +   L  +G+ V +A     AL +++    I L+ T
Sbjct: 527 ETEPL-----VILAVDDDDLVLTNTAGMLETMGHTVFQAGSGREALHMLE-QGRIDLVVT 580

Query: 871 DVVMPEVNGRKLADAARKRRPGLKILFTTGYTRNAVVHNGVLDPGVHLIGKPFTVEELAS 930
           D  MP + G +LADA  +  P L +L  TGY       +  L      + KPF   ELA 
Sbjct: 581 DHAMPGMTGAQLADAIEQTYPDLPVLIITGYAELPADASRRL-----RLDKPFRQAELAM 635

Query: 931 AVRRAIEEDA 940
            V R   + A
Sbjct: 636 MVHRIRHDSA 645



 Score = 52.8 bits (125), Expect = 7e-11
 Identities = 63/261 (24%), Positives = 107/261 (40%), Gaps = 13/261 (4%)

Query: 170 VYAKDRDGRLMIGNHGTSELVGKVPQDYIGRTDLELLEDKQQAA----AIMETDQRIMVS 225
           ++  D  G ++  N G   + G   ++ IG+       +  +AA    A++ T +   V 
Sbjct: 30  IFMLDPAGFVVSWNSGAQRIKGYSAEEIIGQHFSAFYTEGDRAAHVPAAVLRTAE---VE 86

Query: 226 GRSEQVEENVDFPDGRRAIWLSTK-SPLRDLGGEVVGLVGTSLDITERKAIEASHREIEE 284
           GR E     +   DG R  W +    P+RD  G ++G    + D+TER+A +   R  EE
Sbjct: 87  GRFEAEGWRLR-KDGTR-FWANVVIDPIRDPAGHLLGFAKVTRDLTERRAAQEELRRSEE 144

Query: 285 RYRLAIGATSDVIWDWRFADGHVI-WNEALGTRFGHVQEQTSAQWWLDHIHPDDR-ARID 342
           R+RL + + +D         G +  WN       G+  E+   Q +      +DR A + 
Sbjct: 145 RFRLLVQSVTDYAIYMIDPVGTITSWNSGAERFKGYSAEEIMGQNFARFYSEEDRMAGLP 204

Query: 343 ESIHAVIDHGGSNWTDEYRFRRADGSHAFVLDRGTVLRSDDGAPMRMIGAMLDLTERKAA 402
                     G    + +R R+ DG+  +       +R   G  +       DLTER+ A
Sbjct: 205 SRALDTAQREGRFEAEGWRIRK-DGTRFWASVVIDPIRDPAGELLGFAKITRDLTERRQA 263

Query: 403 EAALAASEERLRLATEAADIG 423
             AL  + E +  + +   IG
Sbjct: 264 AQALEQAREAIFQSQKMDAIG 284



 Score = 50.8 bits (120), Expect = 3e-10
 Identities = 73/294 (24%), Positives = 120/294 (40%), Gaps = 47/294 (15%)

Query: 34  AGAIVGTWFCDVPADRFTV------DEAFAEAFGLDPA-------TGRD---GVTLEKIV 77
           +GA +GT     P +RF +      D A    F LDPA       +G     G + E+I+
Sbjct: 2   SGAEMGTTETGQPVNRFELLVQSVTDYAI---FMLDPAGFVVSWNSGAQRIKGYSAEEII 58

Query: 78  TT------AHPDDRSGLQRAIEDALDKGGRYAHQYRVLRADGQYLWIEAKGHVVHDESGA 131
                      D  + +  A+    +  GR+  +   LR DG   W       + D +G 
Sbjct: 59  GQHFSAFYTEGDRAAHVPAAVLRTAEVEGRFEAEGWRLRKDGTRFWANVVIDPIRDPAGH 118

Query: 132 PISFLGVLIDVGDRRRLEAE----RDSARALLTNFADAMPGVVYAKDRDGRLMIGNHGTS 187
            + F  V  D+ +RR  + E     +  R L+ +  D     +Y  D  G +   N G  
Sbjct: 119 LLGFAKVTRDLTERRAAQEELRRSEERFRLLVQSVTDY---AIYMIDPVGTITSWNSGAE 175

Query: 188 ELVGKVPQDYIGRTDLELLEDKQQAAAI----METDQRIMVSGRSEQVEENVDFPDGRRA 243
              G   ++ +G+       ++ + A +    ++T QR    GR E     +   DG R 
Sbjct: 176 RFKGYSAEEIMGQNFARFYSEEDRMAGLPSRALDTAQR---EGRFEAEGWRIR-KDGTR- 230

Query: 244 IWLSTK-SPLRDLGGEVVGLVGTSLDITERK----AIEASHREIEERYRL-AIG 291
            W S    P+RD  GE++G    + D+TER+    A+E +   I +  ++ AIG
Sbjct: 231 FWASVVIDPIRDPAGELLGFAKITRDLTERRQAAQALEQAREAIFQSQKMDAIG 284