Pairwise Alignments

Query, 941 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 795 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  335 bits (859), Expect = 7e-96
 Identities = 241/684 (35%), Positives = 363/684 (53%), Gaps = 42/684 (6%)

Query: 272 RKAIEASHREIEERYRLAIGATSDVIWDWRFADGHVIWNEALGTRFG-HVQEQTSAQWWL 330
           R+  E +  ++E R R+AI A     WD R  +G ++W++   T FG     + S + + 
Sbjct: 131 RRRAEEALADVEARARIAIDAAGMGTWDLRPQEGLLLWDDRCKTLFGVPTSTEMSLEVFY 190

Query: 331 DHIHPDDRARIDESI-HAVIDHGGSNWTDEYRFRRADG-SHAFVLDRGTVLRSDDGAPMR 388
             I+PDD   + E++ HA+      ++  E+R  + +G    ++L  G     DD   +R
Sbjct: 191 AGIYPDDLPLVREAVEHAMRPESDGHYRVEFRIAQPNGLEPRWLLSSGQSQFVDDQC-VR 249

Query: 389 MIGAMLDL-TERKAAEAALAASE---ERLRLATEAADIGLWDV--DL-------VEDVLI 435
             G + D+  +R+A +A    +E   ER+   T   D   W++  DL       +  V +
Sbjct: 250 FSGVLQDIHAQRQATQALRQLNEMLGERVERRTRERD-RAWELSQDLLAVLNKDLTPVAL 308

Query: 436 WPARTKAMFGISPDVPVSMRDFYAGLHPDDLDATTAAFAAAADPGQRALYDVEYRTVGKE 495
            PA  +A  G S +  +S       L   D +      AA A     A +       G +
Sbjct: 309 NPA-WEASLGFSRE-RLSQSSLLHLLPEHDQEQLLTELAALAHGRTSARFVGRILHAGGQ 366

Query: 496 DGIVRWVAAKGRGVFDDVRCVRVVGVAIDVTARKADEALLHELNERLELRVAQEVAERTK 555
              + WV      V +D     +  VA D+T+ +     L + N RL     +++ ER +
Sbjct: 367 QRWLSWVV-----VPED---TLLYVVARDITSEREAALSLADANARLR----EQINERER 414

Query: 556 AEDALRQSQKMESVGQLTGGIAHDFNNMLAVVVGSLDLLTRRLGDDD-PRARRYVDSAMD 614
            E AL+Q Q++E+VGQLT G+AHDFNN+L V++     L R L   D  +AR  +    +
Sbjct: 415 IEAALQQMQRLEAVGQLTAGVAHDFNNLLTVILTGASFLERDLAKADLDKARTRLTHIRE 474

Query: 615 GARRAAQLTQRLLAFSRQQPLKPESIDANKLVDGMSDMLRHTL-PDIQPETVLAGGLWRA 673
              R A+LT +LLAFSR+Q L+P  ++ N+ + G+ ++LR TL  +I     L   LW+A
Sbjct: 475 AGERGAKLTSQLLAFSRRQRLEPVPLNLNRTLAGLEELLRRTLGGNISVRLDLDLALWQA 534

Query: 674 FADPNQLENVILNLAVNARDAMAGGGKLIIETANCYLDSRYAEELIGVPAGEYVMIAVSD 733
             DP Q E +ILNLA+NARDAM+ GG+L + T N  +D R        P GEYVM+++ D
Sbjct: 535 LTDPTQTEMIILNLAINARDAMSDGGQLTLTTRNTLIDKRPQRPEDPDP-GEYVMLSIRD 593

Query: 734 TGSGMPQEVVARAFDPFFTTKEVGRGTGLGLSQVYGFVKQSGGHVRIYSEVGEGTTVKVY 793
           TG GM +EV+A+ F+PFFTTK++G+G+GLGL+QV+GF KQSGG VRI + +G GT V VY
Sbjct: 594 TGCGMSEEVLAKVFEPFFTTKDIGKGSGLGLAQVFGFAKQSGGGVRIDTTLGRGTEVAVY 653

Query: 794 LPRLL-GAVEEVAGVAMDETLPRGESQELILLVEDEPGVRQFSFDALSELGYRVLEADGA 852
           LP +    V E     + +++        +LLV+D+  VR    D L + GY+V +A   
Sbjct: 654 LPAVKEEMVNEPVPAVLSQSISESGHNRTVLLVDDDHLVRDMLGDVLRQYGYQVRQAHSG 713

Query: 853 AAALTLIDAHPEITLMFTDVVMPEVNGRKLADAARKRRPGLKILFTTGYTRNAVVHNGVL 912
             AL L+D   +I L+ TD  MPE NG +LA AAR+R P L ++F TGY        G+ 
Sbjct: 714 EQALALLD--DDIDLLLTDFAMPEFNGAQLALAARERYPRLPVVFLTGYAE----LQGLE 767

Query: 913 DPGVHLIGKPFTVEELASAVRRAI 936
            PG  +I KP   +ELA A+   +
Sbjct: 768 LPGSLVIQKPVQADELARALNEML 791



 Score =  108 bits (271), Expect = 1e-27
 Identities = 62/172 (36%), Positives = 89/172 (51%)

Query: 385 APMRMIGAMLDLTERKAAEAALAASEERLRLATEAADIGLWDVDLVEDVLIWPARTKAMF 444
           A  R +  + +   R+ AE ALA  E R R+A +AA +G WD+   E +L+W  R K +F
Sbjct: 117 AVRRALSEVQERQRRRRAEEALADVEARARIAIDAAGMGTWDLRPQEGLLLWDDRCKTLF 176

Query: 445 GISPDVPVSMRDFYAGLHPDDLDATTAAFAAAADPGQRALYDVEYRTVGKEDGIVRWVAA 504
           G+     +S+  FYAG++PDDL     A   A  P     Y VE+R         RW+ +
Sbjct: 177 GVPTSTEMSLEVFYAGIYPDDLPLVREAVEHAMRPESDGHYRVEFRIAQPNGLEPRWLLS 236

Query: 505 KGRGVFDDVRCVRVVGVAIDVTARKADEALLHELNERLELRVAQEVAERTKA 556
            G+  F D +CVR  GV  D+ A++     L +LNE L  RV +   ER +A
Sbjct: 237 SGQSQFVDDQCVRFSGVLQDIHAQRQATQALRQLNEMLGERVERRTRERDRA 288