Pairwise Alignments

Query, 382 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain from Sphingobium sp. HT1-2

Subject, 388 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  122 bits (307), Expect = 1e-32
 Identities = 114/386 (29%), Positives = 171/386 (44%), Gaps = 63/386 (16%)

Query: 11  LFGTALVMTIAMGVSWLHFGRQRHVLTWTASYAVAIL-------QWIANAGGYFLHSRWL 63
           +FG+ L   +   + W  F  Q  +L W    A   L       +W           RW 
Sbjct: 47  IFGSYLAAVMLCWLCWERFDHQV-ILVWLVVLAATSLIRIMMFMKWFRCPNAERTPDRWE 105

Query: 64  FILTGIGLIVSASLLGIGIRQRSGRPLQLLAFAVPAVLVSLAMAIAIGPVGSQIMQGMII 123
                + L++SA+  G+G                         A+A+ P   ++ Q +++
Sbjct: 106 RRYW-VTLLLSAATWGLG-------------------------ALAVMPTDDRLSQVLVM 139

Query: 124 PAYVGLLMAVSALSLWPRNRSFTPPELAFFAALLAFALGQLALATSAGLIRGPDEGKELY 183
              VG  M+VSA+S +   R  T   LA  A +L        L  +  L+  P    ++ 
Sbjct: 140 LFTVG--MSVSAVSCYSAYRYMT---LASMAVVL--------LPCTLWLLFQPSS-MQVG 185

Query: 184 RAILGLFMPTVYVGTAVTAVLVVAGDLAQQLRQQMMH-----------DPLTNILNRRGI 232
            A+  L   T  V  + T  L  A + A +L +QM             D LT ++NRR  
Sbjct: 186 VAVAVLVFSTFVV--SATRKLSDALEKAFRLTRQMERAHNISTRAAQTDELTGLMNRRAF 243

Query: 233 EEAAERAIANARRQGRPVALVICDLDGFKGLNDGYGHMAGDAALRGFAHLLTNAVRRGDV 292
            E A+   A  R   +P+  ++ D+D FK +ND YGH AGD  LR    +++ + R+ DV
Sbjct: 244 FEHAQVLYAQCRHNRQPLCALMMDMDHFKEINDTYGHQAGDQVLRQIGGVISTSFRQADV 303

Query: 293 VGRLGGDEFGLLMVDTGAEVAADAMERVRAEISCLRLGEAPQALLRASFGVTDLRPDDRE 352
            GRLGG+EF +L+ +T  E A D  E++   IS   L   P   L AS GV      D++
Sbjct: 304 YGRLGGEEFAVLLPNTSLETARDIAEQLIKAIS--GLASEPVHGLTASLGVASTHAQDQD 361

Query: 353 LDDLVARADAALYAAKREGKNRVTVA 378
           L  L+  AD ALY AK +G+N+V VA
Sbjct: 362 LHGLMNTADKALYRAKAQGRNQVAVA 387