Pairwise Alignments

Query, 573 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Sphingobium sp. HT1-2

Subject, 600 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  324 bits (830), Expect = 7e-93
 Identities = 203/564 (35%), Positives = 298/564 (52%), Gaps = 28/564 (4%)

Query: 12  FVLETIANIEGIASLPAFTAATPELIEAVLDESAKLAEQVFAPLNKIGDIEGSVWRNGEV 71
           F L  + + E +   P F   + E  +A L  +  +AE+ FAP N+  D     + +G  
Sbjct: 13  FELYEVLDAEALTLRPRFAEHSRETFDAALTTARTIAEKYFAPHNRKADENEPRYVDGRA 72

Query: 72  SLPDGYASAFRQYVAGGWGSLGSDPRWGGQGLPFVLALAVQEQLTAANMAFALNMMLTLG 131
            L      A   ++  G+ +   D   GG  LP +++ A      AAN        LT+G
Sbjct: 73  ELIPEVKPAVDAFLEAGFLNANRDFEVGGMQLPSLVSQACIAHFQAANAGTTAYPFLTMG 132

Query: 132 AIEALQSHASDDLNALYLTKLVSGEWTGTMNLTEPQAGSDVGALRTRAEPAADGTWRIKG 191
           A   ++S  SD+   L+L  ++ G + GTM LTEP AGS +  +RTRAEPA DG++R+KG
Sbjct: 133 AANLIESFGSDEQKRLFLQPMIDGRYFGTMALTEPHAGSSLADIRTRAEPAGDGSYRLKG 192

Query: 192 SKIFITWGEHDLAENIVHLVLARTPGSPAGTKGISLFLVPKFLED-----GVRNDLRCVS 246
           +KIFI+ G+H+L+ENIVH+VLA+ P +P G KGISLF+VPK+  +     G RND+    
Sbjct: 193 NKIFISGGDHELSENIVHMVLAKLPDAPPGVKGISLFIVPKYHVNPNGSRGPRNDVLLAG 252

Query: 247 IEHKLGIHASPTCTMSFGDADGCVGYMVGAENGGMRAMFTMMNHARINVGLQGVGIAERA 306
           + HK+G   + +  ++FGD   CVGY+VG  + G+  MF MMN ARI VG+  V +    
Sbjct: 253 LFHKMGWRGTTSTALNFGDNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGYAG 312

Query: 307 YQAALGYARERVQG------------LRIIDYPDVRRMILTMRATTEAIRALAYFNAAAV 354
           Y  +L YAR+R QG            + II++ DV+RM+L  +A  E    L  + A   
Sbjct: 313 YLYSLEYARQRPQGRLPDNKDPHSPAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYAARLF 372

Query: 355 DRGHSGDAQ-----AQMLADLLTPVTKAYATDMGVEVASLGIQVFGGMGFIEETGAAQHF 409
           D  H+   +     AQ L DLLTP+ K++ +   ++   L IQ+ GG G+  E    Q++
Sbjct: 373 DDTHTAPDENARKPAQDLLDLLTPIVKSWPSAFCLKANELAIQILGGHGYTREYPVEQYY 432

Query: 410 RDARIAPIYEGTNGIQAMDLVGRKLRQ---GRWEALFAEIATEIDLAGATPETAALQAPL 466
           RD R+ PI+EGT GIQ++DL+GRKL Q      + L   IA   + A   P    L+ PL
Sbjct: 433 RDNRLNPIHEGTEGIQSLDLLGRKLAQHNGAGLKQLIRLIAATCERASHHPNLDPLRQPL 492

Query: 467 EA---ALSALTHATKWMLDQSDAQDVTAGASPYLRMFGILMGGYLLARQARIACERIAGG 523
           E     L  +T A    L Q       A ++ YL+ FG  + G+    QA  A   +  G
Sbjct: 493 EQLANRLQGVTLALLGDLAQGKVAGALANSALYLKAFGHCVIGWRWLEQAVHAELGMLKG 552

Query: 524 TADNLPFLRTKIATASFFITQILP 547
           TA +  F   K+  A +F+T  +P
Sbjct: 553 TAADRDFYLGKLQAARYFLTWEVP 576