Pairwise Alignments

Query, 573 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Sphingobium sp. HT1-2

Subject, 599 a.a., Acyl-CoA dehydrogenase from Alteromonas macleodii MIT1002

 Score =  418 bits (1074), Expect = e-121
 Identities = 246/598 (41%), Positives = 348/598 (58%), Gaps = 32/598 (5%)

Query: 3   FRVPLVEQLFVLETIANIEGIASLPAFTAATPELIEAVLDESAKLAEQVFAPLNKIGDIE 62
           ++ P  + +FV   + N +       F  A+ +L+ A+  E+AK +E V AP+N  GD E
Sbjct: 4   YKAPQRDAMFVTHELLNYQNHYQKLGFDEASEDLVSAIFAEAAKFSENVLAPINASGDEE 63

Query: 63  GSVWRNGEVSLPDGYASAFRQYVAGGWGSLGSDPRWGGQGLPFVLALAVQEQLTAANMAF 122
           G  W +GEV+ P G+  A++ YV GGW  +     +GGQ LP+ L+  + E  + AN ++
Sbjct: 64  GCKWVDGEVTTPKGFKEAYQTYVEGGWPGMSHPEEFGGQALPYSLSSIIAEWFSGANHSW 123

Query: 123 ALNMMLTLGAIEALQSHASDDLNALYLTKLVSGEWTGTMNLTEPQAGSDVGALRTRAEPA 182
           A+   L+ G +  +++H S+ L  ++L KLVSGEWTGTM LTE   GSD+G L+ RAEP 
Sbjct: 124 AMYPGLSQGCMATIKAHGSELLQKMFLEKLVSGEWTGTMCLTEAHCGSDLGMLKCRAEPQ 183

Query: 183 ADGTWRIKGSKIFITWGEHDLAENIVHLVLARTPGSPAGTKGISLFLVPKF--LEDGV-- 238
            DGT+ + G+KIFI+ GEHDL+ENIVH+VLAR P +P GTKGISLF+VPKF   EDG   
Sbjct: 184 EDGTYSLTGTKIFISAGEHDLSENIVHIVLARLPDAPEGTKGISLFVVPKFNVSEDGEKQ 243

Query: 239 -RNDLRCVSIEHKLGIHASPTCTMSFGDADGCVGYMVGAENGGMRAMFTMMNHARINVGL 297
            RN + C SIEHK+GI AS TC ++F   DG  GY++G  N G+  MFT MN ARI  GL
Sbjct: 244 DRNAVGCGSIEHKMGIKASATCVINF---DGAKGYLIGPPNRGLNCMFTFMNTARIGTGL 300

Query: 298 QGVGIAERAYQAALGYARERVQ-----GLR--------IIDYPDVRRMILTMRATTEAIR 344
           +G+  +E A+Q AL YA++R+Q     G +        II +PDVRRM+LT +A  E  R
Sbjct: 301 EGLASSEAAFQGALRYAKDRIQFRSLTGRKNPDGPADPIIVHPDVRRMLLTQKAFAEGNR 360

Query: 345 ALAYFNAAAVDRGHSGDAQAQ-MLAD----LLTPVTKAYATDMGVEVASLGIQVFGGMGF 399
           ALA +    VD    G  +A+  LAD     LTP+ KA+ T+   E  S G+QV+GG GF
Sbjct: 361 ALAAYCMQLVDVTLYGSDEAEKQLADAKLAFLTPIVKAFLTETAQEATSYGMQVYGGHGF 420

Query: 400 IEETGAAQHFRDARIAPIYEGTNGIQAMDLVGRKLRQGRWEALFAEIATEIDLAGATPET 459
           I+E G  Q  RD RI  +YEGT GIQA+DL+GRK+     E L   +    D   +  + 
Sbjct: 421 IKEWGMEQLARDTRICTMYEGTTGIQAVDLLGRKVMGSNGELLNVFVQEVRDYCNSLRDN 480

Query: 460 AALQAPLEAALSALTHATKWMLD-----QSDAQDVTAGASPYLRMFGILMGGYLLARQAR 514
           A   A   A  S L    +  +D      S+  ++ A +  YL   G +   Y   + A 
Sbjct: 481 AQFSAWTNALNSHLDEWQQITMDIGKAAASNPDEIGAASVDYLMYSGYVTVAYFWLKMAV 540

Query: 515 IACERIAGGTADNLPFLRTKIATASFFITQILPQAGALLSAATAGAAPLYAISEDQFA 572
            A E++  G+ +   F ++KI T  F+  ++L +  +L+SA  +GA  L ++ E  FA
Sbjct: 541 KAQEQLDAGSTET-EFYKSKILTTGFYFDRLLTRTRSLVSAMQSGADNLMSMPESMFA 597