Pairwise Alignments

Query, 388 a.a., Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Sphingobium sp. HT1-2

Subject, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score =  249 bits (636), Expect = 9e-71
 Identities = 150/373 (40%), Positives = 212/373 (56%), Gaps = 7/373 (1%)

Query: 16  RETTCRFATDKIAPLAKRIDAEDWFPRDELWTSMGELGLHGITVDEQDGGLGLGYLEHVI 75
           R++  R A   +AP+A  ID  D FP  EL    G++GL  + V E  GG G       +
Sbjct: 11  RDSVRRMAERHVAPIAAEIDENDRFPT-ELIPVYGDIGLLQLWVPEAYGGPGANLTMVCM 69

Query: 76  ACEEIARASGAIGLSYGAHTNLCINQIARWGSPEQKAKYLPKLISGEHLGSLAMSEAGAG 135
           A EEI+R S A GL  G  T + +  +  +G+  QK ++LP +  G  L ++A+SE GAG
Sbjct: 70  AREEISRHSEACGLLAG-ETTMFVLPLMHFGTEAQKQRFLPIVAQGRTLTAIALSEPGAG 128

Query: 136 SDVVSMKLKAEATSSGYVLNGTKFWITNATYADTLVVYAKTGE--GSRGITAFIIE-KNM 192
           SDV +++ +A      YV+NG K W +  + AD ++V+AKT +  G   I+ FI++ K M
Sbjct: 129 SDVSAIRTRAVRDGDSYVINGQKQWCSFGSVADYIMVFAKTSDAGGVDNISPFIVDVKTM 188

Query: 193 PGFSIGQKIDKMGMRGSPTAELVFDNCEVPQENALGPVNGGVGVLMSGLDYERAVLAGIP 252
           PG S G+K  KMGMRG+    +  DN  VP EN LG    G    M  LD  R  +A   
Sbjct: 189 PGVSFGKKERKMGMRGAVNVPVYLDNVRVPAENMLGEEGKGFRAAMRALDLNRPAIAAAS 248

Query: 253 LGIMQACLDVVLPYVRERKQFGQPIGHFQLIQAKVADMYVALNSCRAYIYAVARSCDAGR 312
           +G+ Q  LD  + Y ++RKQF + I  FQ +Q  +ADM + + + R  +Y   R+ D G 
Sbjct: 249 VGLAQGALDAAVAYAQQRKQFKRFISEFQGVQFMLADMAMQIQAARCLLYECTRAGDRGE 308

Query: 313 TTRFD--AAAAILLASENTVRVANEAVQALGGAGYTKDWPVERFYRDAKLLDIGAGTNEI 370
             R    A+ A   AS+  ++V  +AVQ LGG GYTKD+PVER  RDAKL  I  GTN+I
Sbjct: 309 WDRLPMLASMAKCFASDMAMKVTTDAVQVLGGYGYTKDYPVERMMRDAKLNQIFEGTNQI 368

Query: 371 RRMLIGRELIGEA 383
           +R++I REL+  A
Sbjct: 369 QRVVIARELLRNA 381