Pairwise Alignments

Query, 538 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  201 bits (510), Expect = 8e-56
 Identities = 167/541 (30%), Positives = 250/541 (46%), Gaps = 44/541 (8%)

Query: 25  RGLEPSPEVTGGLGRIALGDL--LRRSARRFPDKAAVITPSRTITFGQLDEMANRCANML 82
           +GL P+      +  +AL  L  + R+A  + +  AVI  +    + +  +   R A+ L
Sbjct: 6   QGLMPA-----AVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASAL 60

Query: 83  RNEGAKPGDRIATICSNSIDFIIVIFGLHKAGLVWVPINPLIAADDRAYILNHTEASFVI 142
              G   GD +A +  N+   +   FG+   G V   +N  + A+  A++L H EA  +I
Sbjct: 61  AGRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLI 120

Query: 143 ADEHIQNVIPEGAGG---SPPVLA------LGEA-------FDTRLSSASPKEP-DLPIH 185
            D     VI EGA      PP++        GE        ++  L+   P+   + P  
Sbjct: 121 TDREFHAVI-EGALALLEHPPLVVDVDDPEYGEGRAVSQLDYEALLNEGDPEFAWEWPDD 179

Query: 186 ERDLAMIMYTSGTTSRPKGVMHCNLAVYATVMCNIGEWMVTRKDRILIVLPLFHVSAHCL 245
           E     + YTSGTT  PKGV++ +   Y   + N   W +  +   L  LP+FH +  C 
Sbjct: 180 EWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCNGWCY 239

Query: 246 FTTFMAAGATVVLHNGFDPGQVAAAIEDEKVSFFVGLPMMYAAVMDHPIRMTTDFSSLRY 305
             T  A   T V     DP ++   I + KVS   G P++  A+++ P            
Sbjct: 240 PWTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIEHPVQ 299

Query: 306 CIYAMAPMPGPLLRRLLSEFCPTFVLSSGQTEMY-PST---------AMLRPEQQLLKEG 355
            + A A  P  ++  +  +       + G TE+Y P T         A+   E+  +K  
Sbjct: 300 AMVAGAAPPAKVIGAV-EQMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEERARIKSR 358

Query: 356 NYWGEPSIVNDMAIMDDDGTLLPPGQ----VGEIVHRGPNVMLGYYKDEAATAHSRRFGW 411
                P++  D  ++ D  TL P  +    +GEI  RG  VM GY K+  ATA + R GW
Sbjct: 359 QGVRYPTL--DGLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGGW 416

Query: 412 HHTGDLGVIDEDGQLLFVDRLKDIIKSGGENVASVKVEQVLLQHPSIGNAAAIGVPHPRW 471
            HTGDL V   DG +   DRLKDII SGGEN+++++VE  L +H ++  AA +  P  +W
Sbjct: 417 FHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAVLEAAVVARPDEKW 476

Query: 472 QEAVVAVVMLKPG-STAGAQEILDHCRAALAPHEVPKAVQFVDDLPLTATSKLRKVELRD 530
            E   A V LKPG       +I   CR  LA  +VPK V F  +LP T+T K++K  LRD
Sbjct: 477 GETPCAFVALKPGREDTREADITSWCREHLAGFKVPKTVVF-GELPKTSTGKIQKYVLRD 535

Query: 531 R 531
           R
Sbjct: 536 R 536