Pairwise Alignments

Query, 1105 a.a., Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 1173 a.a., DNA polymerase III subunit alpha from Pseudomonas simiae WCS417

 Score =  368 bits (945), Expect = e-105
 Identities = 307/1088 (28%), Positives = 500/1088 (45%), Gaps = 101/1088 (9%)

Query: 8    YVELQVTTHFSFLRGASSPEDLFATAAAMEMPALGVVDRHSVAGIVRAWDAERQTGVRAI 67
            +V L++ T +S + G    + L  T   M MPA+ V D++++  +V+ +      G++ I
Sbjct: 5    FVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAGIKPI 64

Query: 68   VGCRLDLTDG------TALLVYPTDKAAYGRLCRLLSIG---KTRAGKGACHLDWSDVAD 118
             G  L L++       + + +   +   Y  L  L+S G     R G      +W  VA+
Sbjct: 65   CGADLWLSNKDPDNPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIEREW--VAE 122

Query: 119  WNEGLLAMLVPDRAD-------ATTQAALARTK---RLFGERTYMALSVRRRPKDAIRLR 168
             +EGL+ +      +          Q A    K   ++F +R Y+ +    RP D   L 
Sbjct: 123  ASEGLIMLSAAKEGEIGIALLGGNPQEAEVLAKEWMQVFPDRFYLEVQRTNRPNDEEHLH 182

Query: 169  DLSRIAAAAGVPTIATNDVLYHVPERRQLQDVVTCIREKCTIDTLGRTRERFADRYLKTG 228
                +A   G P +ATNDV +   E  +  +   CI E   +D   R++    ++YLK+ 
Sbjct: 183  AAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYLKSA 242

Query: 229  AEMTRLFRRYLKDSSPVARSVEFARRCAFSLDELKYQYPDEIQVPGRTPQEELERLTW-- 286
             EM  LF         +  SVE A+RC   +   K+  P+     G T  E   ++++  
Sbjct: 243  EEMAELFSDL---PEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDG 299

Query: 287  --EKAPMRYPQGV--DDKVRRQ-----LEHELQLIGQLDYAPYFLTVHAIVAEARRREI- 336
              E+  +  P+    D + +RQ     L  EL +I Q+ +  YFL V   +  A+   + 
Sbjct: 300  LEERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVP 359

Query: 337  LCQGRGSAANSAVCYVLGITSIDPVRSELLFERFVSAERREPPDIDVDFEHERREEVIQW 396
            +  GRGS A S V YV  IT +DP+  +LLFERF++ ER   PD DVDF  + R+ VI++
Sbjct: 360  VGPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEY 419

Query: 397  IYETYGRTRSALTAVVTRFRARGAVREV----GKALGLSEDVTAGLAGAIWGYSREGVEE 452
            + E YGR   +         A+  +R+V    GK+ GL++ ++  +   + G + E   E
Sbjct: 420  VAEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEV-GMTLEKAYE 478

Query: 453  KHAQELNLDLSDTRLALTLDLARQLIDTPRHLSQHPGGFVLTRDRLDELVPIEPAAMDDR 512
            +     +    D   A   D+AR+L    R++ +H GG V+   +L +  PI        
Sbjct: 479  QEEILRDFIKIDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGG 538

Query: 513  QVIEWDKDDIDLLGFMKVDVLALGMLSCMRRAFEFLENDKGLRH----DLATIPAEDPAT 568
             V ++DKDD++  G +K D L L  L+ +  A + +  D+   +    D+A IP +D  T
Sbjct: 539  LVTQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDKPT 598

Query: 569  YAMIRRADTLGVFQIESRAQMASIPLMAPKTFYDLVIQVAIVRPGPIQGDMVHPYRRRRN 628
            Y ++++A+T  VFQ+ESR     I  + P    DL+  VA+ RPGP+Q  MV  +  R++
Sbjct: 599  YTLLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKH 658

Query: 629  GEEEVTYP-----TEELRRVLEKTLGVPLFQEQAMRVAIECAGFTASEADLLRRAMATFK 683
            G  E+ YP      E L+ VL  T G+ L+QEQ M++A   AG+T   AD+LRRAM   K
Sbjct: 659  GRAELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGK-K 717

Query: 684  LTGGVSDFRDKLISGMVSRGYDQEFAEKTFKQIEGFGSYGFPESHAASFALIAYASSWMK 743
                ++  R   I G  +   D + A   F  +E F  YGF +SH+A++ L++Y ++W+K
Sbjct: 718  KPEEMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLK 777

Query: 744  CHHPDAFCASLLNAQPMGFYAPAQIVRDAREHGVEIRPIDVNASRWDCTL-EEGRGRYKA 802
             H+P  F A++L+A          ++ + R   + +   DVNAS +  T+ +EGR  Y  
Sbjct: 778  AHYPAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIY-- 835

Query: 803  VRLGLRMARDLANADAAAIVTARGDRPFTSIEEIQQRAGVGR------------GALDRI 850
               GL   + +      AI  AR D PF  + +   R  + R            GALDR+
Sbjct: 836  ---GLGAIKGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRL 892

Query: 851  G----DADGFGSLGADRRSGLW------AVKGL---------GNAAL--PLFAAADERAG 889
            G    D         DR   +       A+K           G+A L   LF   D    
Sbjct: 893  GPYFHDEPKAYQANIDRNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVY 952

Query: 890  KLREEAIEPTVILAEMGEGAEVVEDYRASGLSLRAHPVAFLREELKARRMITCEQLRTTR 949
                +A E T+     GE   +       GL L  HP+     E++         L+  R
Sbjct: 953  GNHRKAKELTLKERLKGEKDTL-------GLYLTGHPIDEYEGEIRRFARQRIIDLKPAR 1005

Query: 950  DGRWIELAGLVLVRQKPGSAKG--VMFITLEDETDLANLVVWTNVFEKNRRTVLGASMMG 1007
            D + +  AG+++  +   + KG  + FITL+D +      ++ + F   +  +   +M+ 
Sbjct: 1006 DTQTV--AGMIIALRVMKNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVV 1063

Query: 1008 VRGQVQRE 1015
            V G+V  +
Sbjct: 1064 VEGEVSND 1071