Pairwise Alignments

Query, 1105 a.a., Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 1174 a.a., DNA polymerase III, alpha subunit from Pseudomonas putida KT2440

 Score =  354 bits (908), Expect = e-101
 Identities = 315/1135 (27%), Positives = 502/1135 (44%), Gaps = 114/1135 (10%)

Query: 8    YVELQVTTHFSFLRGASSPEDLFATAAAMEMPALGVVDRHSVAGIVRAWDAERQTGVRAI 67
            +V L+V + FS + G    + L      M MPA+ + D+ ++  +V+ +      G++ I
Sbjct: 5    FVHLRVHSEFSLVDGLVRIKPLAKALTGMNMPAVAITDQSNMCSLVKFYKTAMGAGIKPI 64

Query: 68   VGCRLDLTDG------TALLVYPTDKAAYGRLCRLLSIGKT---RAGKGACHLDWSDVAD 118
             G  L L         + +     D   Y  L  L+S G T   R G      +W  +A 
Sbjct: 65   CGADLWLAGADPEAPLSRICFLAMDPKGYRNLTELISRGWTDGQRNGLVILQREW--IAP 122

Query: 119  WNEGLLAMLVPDRADA----------TTQAALARTKRLFGERTYMALSVRRRPKDAIRLR 168
             +EGL+A+      D             +A L     +F ER Y+ +    R +D   + 
Sbjct: 123  ASEGLIALSAGKEGDIGMALLAGRQDEAEALLQDWMGMFPERFYVEVQRTNRARDEEYVH 182

Query: 169  DLSRIAAAAGVPTIATNDVLYHVPERRQLQDVVTCIREKCTIDTLGRTRERFADRYLKTG 228
                +A   G P +ATNDV +         +   CI E  T+D   R R     +YLK+ 
Sbjct: 183  AAVALADKLGAPLVATNDVRFIKQADFDAHETRVCIGEGWTLDDPRRPRCYSDQQYLKSA 242

Query: 229  AEMTRLFRRYLKDSSPVARSVEFARRCAFSLDELKYQYPDEIQVPGRTPQEELERLTWEK 288
             EM  LF   L D+  +A +VE A+RC   +   KY  PD     G    + L  +  E 
Sbjct: 243  EEMAELFSD-LPDA--IANTVEIAKRCNIQVQLGKYFLPDFPTPNGMGIDDYLRHVAHEG 299

Query: 289  APMR----YPQGVDDKVRRQ-------LEHELQLIGQLDYAPYFLTVHAIVAEARRREI- 336
               R    +P+        +       L+ EL +I Q+ +  YFL V   +  A+  ++ 
Sbjct: 300  LEERLAVLWPKETTPNYEEKRQVYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNDVP 359

Query: 337  LCQGRGSAANSAVCYVLGITSIDPVRSELLFERFVSAERREPPDIDVDFEHERREEVIQW 396
            +  GRGS A S V YVL IT +DP+  +LLFERF++ ER   PD DVDF  + R+ VI +
Sbjct: 360  VGPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDY 419

Query: 397  IYETYGRTRSALTAVVTRFRARGAVREV----GKALGLSEDVTAGLAGAIWGYSREGVEE 452
            + E YGR   +         A+  VR+V    GK+ GL++ ++  +   + G + E   E
Sbjct: 420  VAEAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEV-GMTLEKAYE 478

Query: 453  KHAQELNLDLSDTRLALTLDLARQLIDTPRHLSQHPGGFVLTRDRLDELVPIEPAAMDDR 512
            +     +    D       D+A +L    R   +H GG V+   +L +  PI        
Sbjct: 479  QEEILRDFLKGDEDAREIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPIACDEEGGG 538

Query: 513  QVIEWDKDDIDLLGFMKVDVLALGMLSCMRRAFEFLENDKGLRH----DLATIPAEDPAT 568
             V ++DKDD++  G +K D L L  L+ ++ A E +  ++  ++    ++  IP +D  T
Sbjct: 539  LVTQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKNLPDLNIDFIPLDDRKT 598

Query: 569  YAMIRRADTLGVFQIESRAQMASIPLMAPKTFYDLVIQVAIVRPGPIQGDMVHPYRRRRN 628
            Y ++++A+T  VFQ+ESR     I  + P    DL+  VA+ RPGP+Q  MV  +  R++
Sbjct: 599  YELLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKH 658

Query: 629  GEEEVTYP-----TEELRRVLEKTLGVPLFQEQAMRVAIECAGFTASEADLLRRAMATFK 683
            G  E+ YP      E L+ VL  T G+ L+QEQ M++A   AG+T   AD+LRRAM   K
Sbjct: 659  GRAELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGK-K 717

Query: 684  LTGGVSDFRDKLISGMVSRGYDQEFAEKTFKQIEGFGSYGFPESHAASFALIAYASSWMK 743
                ++  R   I G V+   D + A   F  +E F  YGF +SH+A++ L++Y ++W+K
Sbjct: 718  KPEEMAKQRGGFIEGCVANNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLK 777

Query: 744  CHHPDAFCASLLNAQPMGFYAPAQIVRDAREHGVEIRPIDVNASRWDCTL-EEGRGRYKA 802
             H+P  F A++L+A          +V + R   + +   DVN S +  T+  +GR  Y  
Sbjct: 778  THYPAPFMAAVLSADMHNTDKVVVLVEEVRSMKLRLDAPDVNFSDFKFTVNNDGRIVY-- 835

Query: 803  VRLGLRMARDLANADAAAIVTARGD-RPFTSIEEIQQRAGVGR------------GALDR 849
               GL   + +      AIV AR    PF  + +  +R  + R            GALDR
Sbjct: 836  ---GLGAIKGVGEGPVEAIVEARAQGGPFKDLFDFCERIDLKRVNKRTLDALVRSGALDR 892

Query: 850  IGD-----------------ADGFGSLGADRRSGLWAVKGLGNAALPLFA----AADERA 888
            +G                  A    +LG   ++   A     +  + LF     AAD   
Sbjct: 893  LGPHFHDEIKAYHANIDINRATLLSALGEAIKAAEQAAHTADSGHVDLFGSMFDAADVDV 952

Query: 889  GKLREEAIEPTVILAEMGEGAEVVEDYRASGLSLRAHPVAFLREELKARRMITCEQLRTT 948
                 +  E T+     GE   +       GL L  HP+     E++         L+ +
Sbjct: 953  YANHRKVRELTLKERLKGEKDTL-------GLYLTGHPIDEYETEIRRFARQRIVDLKPS 1005

Query: 949  RDGRWIELAGLVLVRQKPGSAKG--VMFITLEDETDLANLVVWTNVFEKNRRTVLGASMM 1006
            R+ + I  AG+++  +   + KG  + F+TL+D +      ++ + F      +   S++
Sbjct: 1006 RETQTI--AGMIIALRVMKNKKGDKMGFVTLDDRSGRIEASLFADAF------MAAQSLL 1057

Query: 1007 GVRGQVQREGEVIHVIAQRLDDLSGMLASVGRRADVADIYRVSRADIARNPTAPD 1061
                 V  EGEV +      DD SG L    ++    +  R   A+  R   A D
Sbjct: 1058 QTDAMVVVEGEVSN------DDFSGGLRLRVKQVMTMEDARTKLAESLRLKVAHD 1106