Pairwise Alignments

Query, 886 a.a., Excinuclease ABC subunit A paralog of unknown function from Sphingobium sp. HT1-2

Subject, 971 a.a., Excinuclease ABC subunit A from Sphingobium sp. HT1-2

 Score =  508 bits (1309), Expect = e-148
 Identities = 299/760 (39%), Positives = 422/760 (55%), Gaps = 90/760 (11%)

Query: 139 PRHQPMLYAEDFSPNTVAGACPTCHGIGRVYDATEETMVPDDTLTIRERAVAAW-----P 193
           P  +P L    FS N   GACP C G+G   +   E +VP++ L++++ AV  W     P
Sbjct: 282 PEIEPRL----FSFNAPMGACPACDGLGERQEFDPELVVPNEALSLKKGAVVPWAKSNPP 337

Query: 194 AAWHGQNLRDILVSLGYNVDTPWRDLPKKDRDWILFTDEAPTVPVYAGLTPEQTRVALKR 253
           + ++ Q L  +    G+++DTPW +LP + +  IL            G  P   R    +
Sbjct: 338 SPYYMQVLGSLAKEFGFSLDTPWAELPGEVKLIILHG---------TGGKPVTLRFVDGK 388

Query: 254 R---MEPSYQGTFTGARRYVLETFANTKSALMKKRVSQYIIGRDCPTCDGKRLKREALSV 310
           +   +E  ++G      R +    A T+SA M++ +S+Y     C TC G RLK EAL+V
Sbjct: 389 KSYEVEKPFEGVIGNLNRRL----AQTESAWMREELSKYQTAMPCETCHGARLKPEALAV 444

Query: 311 KFAGLDIAEFGDLTVLKLRDLLTPVAHGEYGGAAAVPKSHVLGKAARDAAVERRVAAGGS 370
           K AG DI+                                         +  R V    +
Sbjct: 445 KIAGEDIS----------------------------------------VSTRRSVVDALA 464

Query: 371 AHKSAPDVRRTPNLSDEKRIAAQRLASELIERLEPLIDLGLGYISLDRSTPTLSSGELQR 430
              + PD      L+D++   A+ +  E++ERL  L ++GL Y++LDR++ TLS GE QR
Sbjct: 465 FFTAMPDA-----LNDQQNQIARAILKEIVERLGFLNNVGLDYLNLDRTSGTLSGGESQR 519

Query: 431 LRLATQLSSQLFGVVYVLDEPSAGLHPADGEALLTILERLKAAGNSLFVVEHDLDVIRRA 490
           +RLA+Q+ S L GV+YVLDEPS GLH  D + LL  L+RL+  GNS+ VVEHD D IR A
Sbjct: 520 IRLASQIGSGLSGVLYVLDEPSIGLHQRDNDRLLVTLKRLRDLGNSVIVVEHDEDAIRAA 579

Query: 491 EWLVDVGPGAGEKGGEVLYSGPIEGLANVETSITRRYLFAEPLRSEHTPRDAKAW----L 546
           +++VD+GPGAG  GG ++  G +  L   + S+T  YL     R    P   +      L
Sbjct: 580 DYIVDMGPGAGVHGGTIVAQGTLPELLAHKDSLTADYL--NGTRRIEVPAKRRKGSGKKL 637

Query: 547 RLEGIRRNNLHGLDVEFPIGCFTAVTGVSGSGKSSLVSQALPELVTEHLGGSPVAEEEDI 606
            +   R NNL G+    P+G FT +TGVSGSGKSS     L       L G+ +      
Sbjct: 638 TVHNARANNLTGVTASIPLGTFTCITGVSGSGKSSFTIDTLYAASARTLNGARIV----- 692

Query: 607 DPLLDVAQNDTEGRIVAGMEHVRRLVRVDQKPIGRTPRSNLSTYSGMFDHVRRIFADTPL 666
                   +D     + G+E+  +++ +DQ PIGRTPRSN +TY+G F ++R  FA  P 
Sbjct: 693 -----AGPHDK----ITGLENCDKVIDIDQSPIGRTPRSNPATYTGAFTNIRDWFAGLPE 743

Query: 667 ARRRHYSPGRFSFNVAQGRCPVCEGEGYVMVELLFLPSVFAPCSTCHGSRYNPQTLEVEW 726
           A+ R Y PGRFSFNV  GRC  C+G+G + +E+ FLP V+  C  CHG+RYN +TLEV++
Sbjct: 744 AQARGYKPGRFSFNVKGGRCEACQGDGVLKIEMHFLPDVYVTCDVCHGARYNRETLEVKF 803

Query: 727 NGRNIAQVLELTVDDACDFFAGEASVMRSLDVLREIGLGYLRLGQPATELSGGEAQRIKL 786
            G +IA +L++TV+DA +FF     +   + +L E+GLGY+++GQ AT LSGGEAQR+KL
Sbjct: 804 KGMSIADILDMTVEDAVEFFKAVPPIRDKMAMLAEVGLGYIKVGQQATTLSGGEAQRVKL 863

Query: 787 ATELQRAQRGNTIYILDEPTSGLHPSDGDRLMRHLRGLVEAGNTVVVVEHDMRAITQADW 846
           A EL R   GNT+YILDEPT+GLH  D  +L+  L  LVE GN+VVV+EH++  I  AD+
Sbjct: 864 AKELSRRATGNTLYILDEPTTGLHFEDVRKLLEVLHALVEQGNSVVVIEHNLDVIKTADY 923

Query: 847 IIDLGPGAGEDGGRIVASGVPGVVAEAEGSLTARYLKAAL 886
           IID+GP  G  GG +VA G P  V + + S T RYL   L
Sbjct: 924 IIDMGPEGGVKGGEVVAQGTPEQVVKEKRSFTGRYLAPLL 963



 Score =  130 bits (327), Expect = 4e-34
 Identities = 59/113 (52%), Positives = 90/113 (79%)

Query: 24  VQIRGARQNNLKNVDVDVPRNAFVVFTGISGSGKSSLAFGTLYAEAQRRYLESVAPYARR 83
           + +RGAR++NLK VDVD+PR++ +V TG+SGSGKSSLAF T+YAE QRRY+ES++ YAR+
Sbjct: 6   ISVRGAREHNLKGVDVDLPRDSLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 65

Query: 84  LIDQAGVPEVDAIDGLPPAVALQQQRGSANARSSVGSVTTLSSLVRMLYSRVG 136
            ++    P+V+ I+GL PA++++Q+  S N RS+V +VT +   +R+L++RVG
Sbjct: 66  FLEMMQKPDVEHIEGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVG 118



 Score = 57.0 bits (136), Expect = 5e-12
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 13/120 (10%)

Query: 546 LRLEGIRRNNLHGLDVEFPIGCFTAVTGVSGSGKSSLVSQALPELVTEHLGGSPVAEEED 605
           + + G R +NL G+DV+ P      +TG+SGSGKSSL   A   +  E        +   
Sbjct: 6   ISVRGAREHNLKGVDVDLPRDSLIVITGLSGSGKSSL---AFDTIYAE-------GQRRY 55

Query: 606 IDPLLDVAQNDTEGRIVAGMEHVRRL---VRVDQKPIGRTPRSNLSTYSGMFDHVRRIFA 662
           ++ L   A+   E      +EH+  L   + ++QK   R PRS ++T + ++D++R ++A
Sbjct: 56  VESLSAYARQFLEMMQKPDVEHIEGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWA 115



 Score = 51.6 bits (122), Expect = 2e-10
 Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 11/142 (7%)

Query: 26  IRGARQNNLKNVDVDVPRNAFVVFTGISGSGKSSLAFGTLYAEAQRRYLESVAPYARRLI 85
           +  AR NNL  V   +P   F   TG+SGSGKSS    TLYA A  R L      A    
Sbjct: 639 VHNARANNLTGVTASIPLGTFTCITGVSGSGKSSFTIDTLYA-ASARTLNGARIVAGPHD 697

Query: 86  DQAGVPEVDAIDGLPPAVALQQQRGSANARSSVGSVTTLSSLVRMLYSRVGEYPRHQPML 145
              G+   D +      + + Q       RS+  + T   + +R  ++ +   P  Q   
Sbjct: 698 KITGLENCDKV------IDIDQSPIGRTPRSNPATYTGAFTNIRDWFAGL---PEAQARG 748

Query: 146 YAED-FSPNTVAGACPTCHGIG 166
           Y    FS N   G C  C G G
Sbjct: 749 YKPGRFSFNVKGGRCEACQGDG 770