Pairwise Alignments

Query, 366 a.a., GTP-binding and nucleic acid-binding protein YchF from Sphingobium sp. HT1-2

Subject, 366 a.a., ribosome-associated potassium-dependent informational ATP/GTPase from Pseudomonas putida KT2440

 Score =  392 bits (1008), Expect = e-114
 Identities = 209/370 (56%), Positives = 259/370 (70%), Gaps = 8/370 (2%)

Query: 1   MGFRCGIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNEGRVAVPDDRLQTIARIGG 60
           MGF CGIVGLPNVGKSTLFNALT++  A A N+PFCTIEPN G V +PD RL  +A I  
Sbjct: 1   MGFNCGIVGLPNVGKSTLFNALTKSGIA-AENFPFCTIEPNSGIVPMPDARLAALAEIVK 59

Query: 61  SAKIIETQLAFVDIAGLVRGASKGEGLGNQFLANIRETDAIVHVLRCFEDDDITHVEGKV 120
             +I+ T + FVDIAGLV GASKGEGLGN+FLANIRETDAI HV+RCFED+++ HV   V
Sbjct: 60  PNRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSV 119

Query: 121 DPIADAETVETELMLADLESLEKRVPNLLKKGAQGDKEAKAAASVLGQTLELLRDGKPAR 180
           DP  D E ++ EL+ ADL+S EK++  + +    GDK+A A  ++L + +    +GKPAR
Sbjct: 120 DPKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDALAQKAILEKLIPHFTEGKPAR 179

Query: 181 -LTQPRDEEEARLFAQAQLLTAKPVLYVCNVEEGAAAEGNAFSARVFEKAAAENASAVIV 239
            L +   ++E  +     LLT+KPV+Y+ NV E               KA AE   AV+V
Sbjct: 180 SLMKHMADDEKAVIRGFHLLTSKPVMYIANVAEDGFDNNPHLDV---VKAIAEEEGAVVV 236

Query: 240 SAA--IEAELITMPV-EERGEYLEALGLTEAGLARIIRAGYELLGLITFFTVGPKEARAW 296
                IEAE+  +   EE+  +LEALGL E GL R+IRAGYELL L T+FT G +E RAW
Sbjct: 237 PVCNKIEAEIAELEDGEEKDMFLEALGLEEPGLNRVIRAGYELLNLQTYFTAGVQEVRAW 296

Query: 297 TVAKGSKAPQAAGAIHSDFEKGFIRAETMAYADYVQFNGEAGAKEAGKWRSEGKDYVTQD 356
           TV  G+ APQAAG IH+DFEKGFIRAE +AY D++QF GEAGAKEAGKWR EGKDY+ +D
Sbjct: 297 TVRVGATAPQAAGVIHTDFEKGFIRAEVVAYDDFIQFKGEAGAKEAGKWRLEGKDYIVKD 356

Query: 357 GDIMLFRFNV 366
           GD+M FRFNV
Sbjct: 357 GDVMHFRFNV 366