Pairwise Alignments

Query, 596 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) from Sphingobium sp. HT1-2

Subject, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

 Score =  472 bits (1214), Expect = e-137
 Identities = 264/602 (43%), Positives = 364/602 (60%), Gaps = 17/602 (2%)

Query: 4   YDAPLRDMRFVLNELHADDGFGDIPALSEFTPDLTDAILEEAARFCRDVLLPINRSGDEE 63
           Y AP++DM F +  L        +P   +   +   A+LEE ARF +DV+ P+N  GD  
Sbjct: 3   YTAPIKDMLFDIEHLANIGEIAKLPGFEDAGLETAQAVLEECARFNQDVIAPLNIEGDRN 62

Query: 64  GCHLENGVVRTPAGFPEAYKQFAEGGWTALASDPEWGGQGLPEAVNKLVEEMICSSNLSF 123
               +NG V T  GF +A+ Q+  GGW  L    ++GGQGLP+ +     EM+ S+N+SF
Sbjct: 63  PSSFKNGAVTTTPGFKDAFAQYVAGGWQGLQHPSDFGGQGLPKTIGAACGEMLNSANMSF 122

Query: 124 GLYPGLTHGATTAIEGHGSDALKQAYLPKMVSGQWSGTMCLTEPHCGTDLGLLRSRAVPQ 183
            L P L+ GA  A+   GSD LK  YL K+VSGQW+GTM LTEP  G+DL ++RSRA PQ
Sbjct: 123 ALCPLLSDGAIEALLTAGSDELKAVYLEKLVSGQWTGTMNLTEPQAGSDLAMVRSRAEPQ 182

Query: 184 GDGSYKVTGSKIFISAGEHDLTENIIHLVLARLPDAPKGVKGISLFLVPKYLPREDGTPG 243
            DG+YKV G+KIFI+ GEHD+ ENI+HLVLAR+  AP+GVKGISLF+VPK+L  +DG+ G
Sbjct: 183 PDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVNKDGSLG 242

Query: 244 QSNGVACAAIEHKMGLKASATCQMNFDD---SIGWIVGEPGKGMAAMFTMMNTERVSVGI 300
           + N V C +IEHKMG+KAS T  + + D   ++G++VG+  +G+  MF MMN+ R +VG+
Sbjct: 243 ERNDVHCVSIEHKMGIKASPTAVLQYGDHGGAVGYLVGQENRGLEYMFIMMNSARYAVGM 302

Query: 301 QGLGVGEAAYQAAAWYAKDRIQGRALSGPKYPDQAADPIIVHPDVRRMLMTMRAYNEGCR 360
           QG+ + E AYQ A  YAKDR+Q R + G      A+ PII HPDV+RMLMTMRAY EGCR
Sbjct: 303 QGIAIAERAYQHAVAYAKDRVQSRPVDG---SINASAPIIHHPDVKRMLMTMRAYTEGCR 359

Query: 361 ALSAWVSRALDAEKHSPEPEVRQRASDFIALMTPVVKALFTDLAFDSANLAVQCYGGHGY 420
           A+++  + A DA  H P+ + R++   F   M P+VK   T+++ +  +L VQ +GG G+
Sbjct: 360 AMASVAAAAYDAAHHHPDADARKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGF 419

Query: 421 IRESGVEQYARDARITMIYEGTNGVQALDLVGRKLGAHMGRYLRSFFHPVSAFIEENNVD 480
           I E+G  QY RDA+I  IYEGT  +QA DLVGRK     G+  ++    ++A IE+   +
Sbjct: 420 IEETGAAQYYRDAKILTIYEGTTAIQANDLVGRKTARDGGQTAKA----IAAQIEKTEAE 475

Query: 481 --GPMKPMIEALAKAFGALQLS----TATVAQRALKDPEEAGAASADYLRLMGLVAMGYC 534
                 P   A+ K   A +L+       VA +    P    A S  YL L G +  G+ 
Sbjct: 476 LAKSDNPAAAAVLKRLTAARLAFIDVVDFVAGQTKASPNAVFAGSVPYLMLAGNLVAGWQ 535

Query: 535 FAKATKIAGLQLFFGSEDKRFYDAKIKTATFFFERILPQATASFLAIKAGKKSLMALEDD 594
            A++  IA   L   S D  F  AK+ TA F+ E IL +      +I  G +S+ AL  D
Sbjct: 536 LARSLIIA-QDLASRSFDTDFMLAKVATARFYAEHILNKVPGIRDSIVDGAESVTALALD 594

Query: 595 VF 596
            F
Sbjct: 595 AF 596