Pairwise Alignments

Query, 596 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) from Sphingobium sp. HT1-2

Subject, 589 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  587 bits (1514), Expect = e-172
 Identities = 305/598 (51%), Positives = 405/598 (67%), Gaps = 11/598 (1%)

Query: 1   MQVYDAPLRDMRFVLNELHADDG-FGDIPALSE-FTPDLTDAILEEAARFCRDVLLPINR 58
           M  Y APLRDMRFVL+++    G +  +PAL+E    D  DAILEEA++    ++ P++R
Sbjct: 1   MTTYSAPLRDMRFVLHDVFNASGLWARLPALAERIDADTADAILEEASKVTGQLIAPLSR 60

Query: 59  SGDEEGCHLENGVVRTPAGFPEAYKQFAEGGWTALASDPEWGGQGLPEAVNKLVEEMICS 118
           +GDE+G   + G V TP GF EA+  + EGGW  L  +PE+GG G+P+ +  L EEM+ +
Sbjct: 61  NGDEQGVCFDAGQVTTPEGFREAWNTYREGGWVGLGGNPEYGGMGMPKMLGVLFEEMLYA 120

Query: 119 SNLSFGLYPGLTHGATTAIEGHGSDALKQAYLPKMVSGQWSGTMCLTEPHCGTDLGLLRS 178
           ++ SF LY  L+ G+  AI+ H S+ALK  YLP +  G+W+GTMCLTEPH GTDLGL+R+
Sbjct: 121 ADCSFSLYSALSAGSCLAIDAHASEALKATYLPPLYEGRWAGTMCLTEPHAGTDLGLIRT 180

Query: 179 RAVPQGDGSYKVTGSKIFISAGEHDLTENIIHLVLARLPDAPKGVKGISLFLVPKYLPRE 238
           RA PQ DGS +++GSKIFI+ GE DLTENI+HLVLA++PDAP G KGISLFLVPK+L   
Sbjct: 181 RAEPQADGSVRISGSKIFITGGEQDLTENIVHLVLAKMPDAPAGAKGISLFLVPKFLVEA 240

Query: 239 DGTPGQSNGVACAAIEHKMGLKASATCQMNFDDSIGWIVGEPGKGMAAMFTMMNTERVSV 298
           DG  G  N V C +IEHKMG+KASATC MNFD +IG++VGEP KG+ AMFTMMN ER+S+
Sbjct: 241 DGRLGARNAVHCGSIEHKMGIKASATCVMNFDGAIGYLVGEPNKGLTAMFTMMNYERLSI 300

Query: 299 GIQGLGVGEAAYQAAAWYAKDRIQGRALSGPKYPDQAADPIIVHPDVRRMLMTMRAYNEG 358
           GIQG+G  EA+YQ+AA YA +R+Q RA +GP+  D+AADPII H DVRRML+TMR   E 
Sbjct: 301 GIQGIGCAEASYQSAARYANERLQSRAATGPQAHDKAADPIIHHGDVRRMLLTMRTLTEA 360

Query: 359 CRALSAWVSRALDAEKHSPEPEVRQRASDFIALMTPVVKALFTDLAFDSANLAVQCYGGH 418
            RA + +V + LD  +++ +   R+ A   +AL+TPV KA FTD   +S  L  Q YGGH
Sbjct: 361 GRAFAVYVGQQLDVARYAEDAGEREHAQRLVALLTPVAKAFFTDNGLESCVLGQQVYGGH 420

Query: 419 GYIRESGVEQYARDARITMIYEGTNGVQALDLVGRKLGAHMGRYLRSFFHPVSAFIEENN 478
           GYIRE G EQ  RD RI  IYEGTNG+QALDL+GRK+ A  G+ L SF   V AF    +
Sbjct: 421 GYIREWGQEQRVRDVRIAQIYEGTNGIQALDLLGRKVLADGGQALASFASEVRAF----S 476

Query: 479 VDGPMKPMIEALAKAFGALQLSTATVAQRALKDPEEAGAASADYLRLMGLVAMGYCFAKA 538
           VD P+    EAL  +   L+ +++ +  +A +D     A + +YL+L GL A  Y +A  
Sbjct: 477 VDAPLHR--EALQASLARLEATSSWLRAQAGEDANLVSAVAVEYLQLFGLTAYAYMWA-- 532

Query: 539 TKIAGLQLFFGSEDKRFYDAKIKTATFFFERILPQATASFLAIKAGKKSLMALEDDVF 596
            ++A + L    ED  F+ AK+  A F+F+R+LP+      +I+AG  SL  LE   F
Sbjct: 533 -RMAAVALAKRDEDDAFHGAKLACAAFYFQRVLPRGLGLEASIRAGSGSLYGLEATQF 589