Pairwise Alignments

Query, 596 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) from Sphingobium sp. HT1-2

Subject, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  627 bits (1617), Expect = 0.0
 Identities = 321/598 (53%), Positives = 413/598 (69%), Gaps = 8/598 (1%)

Query: 1   MQVYDAPLRDMRFVLNEL-HADDGFGDIPALSEFTP-DLTDAILEEAARFCRDVLLPINR 58
           M  Y APLRDMRFVLNE+ +  + +  +P L+E    D   A+LEEA +     + P++R
Sbjct: 1   MADYKAPLRDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMAVLEEAGKVTARTIAPLSR 60

Query: 59  SGDEEGCHLENGVVRTPAGFPEAYKQFAEGGWTALASDPEWGGQGLPEAVNKLVEEMICS 118
           + DEEGCH +NG VRTPAGF EAY  +AEGGW  +  DP +GG G+P+A++  VEEM+ +
Sbjct: 61  AADEEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNA 120

Query: 119 SNLSFGLYPGLTHGATTAIEGHGSDALKQAYLPKMVSGQWSGTMCLTEPHCGTDLGLLRS 178
           S+L+FGLYP LT GA  +I  H S+ALK+ YLP M +G W+G+MCLTEPH GTDLG++R+
Sbjct: 121 SSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT 180

Query: 179 RAVPQGDGSYKVTGSKIFISAGEHDLTENIIHLVLARLPDAPKGVKGISLFLVPKYLPRE 238
           +A PQ DGSYKV+G+KIFI+ GEHDLTENIIHLVLA+LPDAP G KGISLFLVPK+L  E
Sbjct: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNE 240

Query: 239 DGTPGQSNGVACAAIEHKMGLKASATCQMNFDDSIGWIVGEPGKGMAAMFTMMNTERVSV 298
           DG+ G  N   C +IEHKMG++ASATC MNFD+++G+IVGEP KG+AAMFTMMN ER+ V
Sbjct: 241 DGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKGLAAMFTMMNYERLGV 300

Query: 299 GIQGLGVGEAAYQAAAWYAKDRIQGRALSGPKYPDQAADPIIVHPDVRRMLMTMRAYNEG 358
           GIQGL   E +YQ A  YA+DR+Q RA +GP+  D+AADPIIVHPDVRRML+TM+A  EG
Sbjct: 301 GIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHPDVRRMLLTMKALIEG 360

Query: 359 CRALSAWVSRALDAEKHSPEPEVRQRASDFIALMTPVVKALFTDLAFDSANLAVQCYGGH 418
            RA S +V+  LD+ K+S +  VR+R+ + +AL+TPV KA  TDL  + A    Q +GGH
Sbjct: 361 GRAFSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFGGH 420

Query: 419 GYIRESGVEQYARDARITMIYEGTNGVQALDLVGRKLGAHMGRYLRSFFHPVSAFIEENN 478
           GYIRE G EQ  RD RIT IYEGTNG+QALDL+GRK+ A  G Y + F   +  FI    
Sbjct: 421 GYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEIRQFI--TG 478

Query: 479 VDGPMKPMIEALAKAFGALQLSTATVAQRALKDPEEAGAASADYLRLMGLVAMGYCFAKA 538
               +    + L  +   L   T  V Q+A  +P E GAAS +YL   G VA GY +A  
Sbjct: 479 AGSELDEFAKPLGASLDQLDGLTEWVLQQAKGNPNEIGAASVEYLHAFGYVAYGYMWALM 538

Query: 539 TKIAGLQLFFGSEDKRFYDAKIKTATFFFERILPQATASFLAIKAGKKSLMALEDDVF 596
            + A      G  D  FY  K+ TA F+F R+LP+  +   ++KAG +SL  L+ + F
Sbjct: 539 ARAA----LAGEGDAPFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYLLDAEQF 592