Pairwise Alignments

Query, 387 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 86/374 (22%), Positives = 142/374 (37%), Gaps = 17/374 (4%)

Query: 3   RAFVDSARRETAFLRGSVWDLALVTWLPLLLLAIVAVQLSAGVMRNLPIVVVDEDGGGVA 62
           R    + R     LR  V  LA      + ++ I    +S  V  NL   V D+D    +
Sbjct: 537 RLLAVAVREGKELLRDKV-RLAFALLGAVFMMVIFGYGISLDV-ENLAFAVHDQDQSPQS 594

Query: 63  RDLTRKLEASPGLKVAARPPDMAQAEHLVRSNAAYAVVLIPRDLERTVLRGETGKILLFY 122
           R        S      A   D ++    ++ +     + IP    R +  G    +  + 
Sbjct: 595 RAYLEAFRGSRYFAEQAPIRDSSELHQRLQRSEIKLALEIPPGFGRDLYAGRQPVVAAWL 654

Query: 123 NASYSTPSGSVLREVGTVVQAHAKALAGEQSAAIAGPARVRPQPVSVQSRILYNPQTSYE 182
           +      + +    V  V QA+      EQ A  +   + R  PV +++R  YN     +
Sbjct: 655 DGGMPFRAETSRNYVEAVHQANL-----EQLAKASPQPQPRQDPVRLETRFRYN----QD 705

Query: 183 LQLVALIHPALLHLL--FMIAVVSALG--RELRDGTIGAWLAGPRGEAVAAVAGKIAPYI 238
           +  V  I P ++ L+  F+ A+++ALG  RE   G+I  + A P    +  + GK  PY+
Sbjct: 706 VVSVNAIGPGVMALILAFIPAMLTALGIVREKELGSITNFYATPL-TRLEFLLGKQMPYL 764

Query: 239 LIFLLWGALATGYLAVYRGWPVQGSVAMLMGGYLALYLAYAGMALFIVGATLSMGQALSM 298
            + L+  AL           P++GSV  L  G +A  LA   + L I   T +   A+  
Sbjct: 765 AVSLVNLALLVAMNRWLFAVPLKGSVLALACGGVAYLLATTSLGLLISAFTRTQIAAILG 824

Query: 299 TALYAG-ASFAFAGAIFPIESASAFARLWSALLPFTRFARLVAEQWMIGAPVLASLGSIL 357
           T +     +  F+G I P  S    A +   L P   F  +    +     +       L
Sbjct: 825 TMIITSLPTIQFSGLIVPRSSLDGAAAVMGQLFPAGYFLDIAVGTFTKALGLRELWPQCL 884

Query: 358 ALFAFLVVGSGAGL 371
            L +F    +G  L
Sbjct: 885 ILLSFFAAFTGLSL 898