Pairwise Alignments

Query, 387 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 368 a.a., predicted transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 68/352 (19%), Positives = 131/352 (37%), Gaps = 17/352 (4%)

Query: 29  LPLLLLAIVAVQLSAGVMRNLPIVVVDEDGGGVARDLTRKLEASPGLKVAARPPDMAQAE 88
           LP+L+  I+    +   + N  I + DED G  + +LT++   +             +  
Sbjct: 28  LPVLIQVILFPFAATLEVTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIR 87

Query: 89  HLVRSNAAYAVVLIPRDLERTVLRGETGKILLFYNASYSTPSGSVLREVGTVVQAHAKAL 148
             + +  A  +V  P D  R +   +T  + L  +   S  +      +  +V+ + + L
Sbjct: 88  PTIDTQKALLLVRFPADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQEL 147

Query: 149 AGEQSAAIAGPARVRPQPVSVQSRILYNPQTSYELQLVALIHPALLHLLFMIAVVSALGR 208
                       + +P    +  R  YNP   Y+  +V  +   +  +  MI    ++ R
Sbjct: 148 L---------EGKPKPNNSELVVRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAR 198

Query: 209 ELRDGTIGAWLAGPRGEAVAAVAGKIAPYILI--FLLWGALATGYLAVYRGWPVQGSVAM 266
           E   GT+   L  P         GK  P +++  F     LA G  A     P  GS+A+
Sbjct: 199 EREQGTLDQLLVSPL-TTWQIFIGKAVPALIVATFQATIVLAIGIWAYQ--IPFAGSLAL 255

Query: 267 LMGGYLALYLAYAGMALFIVGATLSMGQALSMTALYAGASFAFAGAIFPIESASAFARLW 326
                +   L+  G  L I     +  QA     ++   +   +G + P+E+   + +  
Sbjct: 256 FYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNL 315

Query: 327 SALLPFTRFARLVAEQWMIGAPVLASLGSILALFAFLVVGSGAGLPRYVSAR 378
           + + P   F  +  + ++  A +     S   L+  LV+ +  G   Y   R
Sbjct: 316 TWINPIRHFTDITKQIYLKDASLDIVWNS---LWPLLVITATTGSAAYAMFR 364