Pairwise Alignments

Query, 345 a.a., HlyD family secretion protein from Sphingobium sp. HT1-2

Subject, 343 a.a., predicted membrane fusion protein of efflux pump (NCBI) from Escherichia coli BW25113

 Score = 77.0 bits (188), Expect = 6e-19
 Identities = 69/256 (26%), Positives = 102/256 (39%), Gaps = 5/256 (1%)

Query: 29  LIAFLVVVILGLGLWLAYRPVPDQLQGMVEARELRITSKVSARITAFHVEEGQPVKTGQL 88
           L+  L +V L   +W      P        A  + +  +VS RI    V + Q VK G L
Sbjct: 17  LVVALALVALVFVIWRV-DSAPSTNDAYASADTIDVVPEVSGRIVELAVTDNQAVKQGDL 75

Query: 89  LYTLDSPEVEARSEQAGGALAAA--QANADKADEGARPEDIRAAEAQWRRAQAAADLAQT 146
           L+ +D    EA   +A  +LAA   Q    +    A+     +  A   +A+AAA  A  
Sbjct: 76  LFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVNATVEKARAAAKQATD 135

Query: 147 TYQRTERLFEQGVLAGQKRDESRANALASNEAARAARAQYDLALAGARRQDRQAASGQVR 206
           T +RTE L ++G ++ +  D +R    A+     A   Q   A +     D   A     
Sbjct: 136 TLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAASAVSGVDALVAQRAAV 195

Query: 207 QARGALAEVEAAEKETRVFAPSDGEIGRRLAQSGELVPQGFPVFVLTDIDHPWVTLTLRE 266
           +A  AL ++       R  AP DG +       G+      P+F L D  H +V    RE
Sbjct: 196 EADIALTKLHLEMATVR--APFDGRVISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRE 253

Query: 267 DQFSAIRRGRVLTGRI 282
                IR G   T R+
Sbjct: 254 TDLKNIRSGTPATIRL 269