Pairwise Alignments

Query, 600 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Sphingobium sp. HT1-2

Subject, 600 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  368 bits (944), Expect = e-106
 Identities = 218/594 (36%), Positives = 323/594 (54%), Gaps = 7/594 (1%)

Query: 9   RDTRFVLDHVVGLERYANLPGFENATPDLVEAILTEGGKIASEVLFPINAVGDKEGCTRH 68
           R+  F L  V+  E       F     +  +A ++    IA +   P N   D E   R+
Sbjct: 9   RNLAFELYEVLDAEGLTQRERFAEHNRETFDAAISTARNIAEKYFAPHNRKND-ENEPRY 67

Query: 69  ADGSVTTPTGFKAAYDQFVEGGWTTLHAPTEFGGQGLPNVVATAVTEYVLSANQAFEMYH 128
            DG        K A D F+E G+       E GG  LP +++ A   +  SAN A   Y 
Sbjct: 68  EDGKAILIPEVKPAVDAFLEAGFLNAARSFEAGGMQLPTLLSQACFAHFQSANAASTSYP 127

Query: 129 GLTAGAIAALIAKGSDEQKATYLPNMVSGVWTGTMNLTEPHSGTDLGLIKTKAVPNGDGS 188
            LT GA   + + G+D+QK  +L  M+ G + GTM LTEPH+G+ L  I+T+A P  DG+
Sbjct: 128 FLTMGAANLIESFGTDDQKRRFLQPMIDGRFFGTMALTEPHAGSSLADIRTRAEPAADGT 187

Query: 189 FAISGTKIFISAGEHDLAENIIHLVLAKTPGAPDSSKGISLFVVPKFIVNEDGSLGDRNA 248
           + + G KIFIS G+H L+ENI+H+VLAK P AP   KGISLF+VPKF+VN+DGSLG+RN 
Sbjct: 188 YRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPAGVKGISLFIVPKFLVNDDGSLGERND 247

Query: 249 VSCGSLEHKMGIHGNATCVMNYDG---AKGWLVGEENKGLAAMFIMMNAARLGVGLQGLG 305
           V    L HKMG  G  +  +N+       G+LVG+ ++GL+ MF MMN AR+GVG+  + 
Sbjct: 248 VLLAGLFHKMGWRGTTSTALNFGDNGHCVGYLVGQPHQGLSCMFQMMNEARIGVGMGAVM 307

Query: 306 QGEIAFQNAVHYAKDRRQGRALTGPKEPEEKADTLFVHPDVRRMLMEGKALTEGLRALIL 365
            G   +  ++ YA++R QGR L   K+P     ++  H D++RML+  K+  EG   L L
Sbjct: 308 LGYAGYLYSLEYARERPQGR-LPDSKDPATAPVSIIQHADIKRMLLTQKSYVEGAFDLGL 366

Query: 366 WGALQHDLSHSAATEEERQAADDLLQLLTPVIKGYGTDKGFDVAVSSQQVFGGHGYIWEN 425
           + A   D + +  TE ER+ A +LL LLTP++K + ++        + Q+ GGHGY  E 
Sbjct: 367 YAARLFDDTTTLETEAERKHAHELLDLLTPIVKSWPSEFCLKANELAIQILGGHGYTREY 426

Query: 426 GVEQYVRDARIAQIYEGTNGVQAMDLVGRKLPMNGGRALQAFLKILATEIAEAKGNEKLA 485
            VEQY RD R+  I+EGT+G+Q++DL+GRKL  NGG  L+  ++++A   A A+    L 
Sbjct: 427 PVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGAGLKQLIRLIAETGARAQEYPSLT 486

Query: 486 SFADALEKAKGQLEAATMWLMQNAMKNPDNAG-AGAHHYMHILGIVATGLMWLRMA-KAA 543
           +  + LE+   +L++ T+ L+ +      N+  A +  Y+ + G    G  WL  A +A 
Sbjct: 487 ALREPLEQLVNRLQSVTISLLTDLAHGKVNSSLANSALYLKVFGHTVIGWRWLEQAIRAE 546

Query: 544 TGLLDAGEGDAGFLEAKLVTARFFAERIMPDAGSLRRKIEGGADTLMALDPDMF 597
            G       D  F + KL  AR+F    +P        +E   DT + +  + F
Sbjct: 547 EGFAKGNAADVAFYKGKLQAARYFLTWEVPSCHHELALLEARDDTCLGMQDEWF 600