Pairwise Alignments

Query, 600 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Sphingobium sp. HT1-2

Subject, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

 Score =  473 bits (1217), Expect = e-137
 Identities = 264/600 (44%), Positives = 364/600 (60%), Gaps = 10/600 (1%)

Query: 3   SYNAPVRDTRFVLDHVVGLERYANLPGFENATPDLVEAILTEGGKIASEVLFPINAVGDK 62
           SY AP++D  F ++H+  +   A LPGFE+A  +  +A+L E  +   +V+ P+N  GD+
Sbjct: 2   SYTAPIKDMLFDIEHLANIGEIAKLPGFEDAGLETAQAVLEECARFNQDVIAPLNIEGDR 61

Query: 63  EGCTRHADGSVTTPTGFKAAYDQFVEGGWTTLHAPTEFGGQGLPNVVATAVTEYVLSANQ 122
              +   +G+VTT  GFK A+ Q+V GGW  L  P++FGGQGLP  +  A  E + SAN 
Sbjct: 62  NPSS-FKNGAVTTTPGFKDAFAQYVAGGWQGLQHPSDFGGQGLPKTIGAACGEMLNSANM 120

Query: 123 AFEMYHGLTAGAIAALIAKGSDEQKATYLPNMVSGVWTGTMNLTEPHSGTDLGLIKTKAV 182
           +F +   L+ GAI AL+  GSDE KA YL  +VSG WTGTMNLTEP +G+DL +++++A 
Sbjct: 121 SFALCPLLSDGAIEALLTAGSDELKAVYLEKLVSGQWTGTMNLTEPQAGSDLAMVRSRAE 180

Query: 183 PNGDGSFAISGTKIFISAGEHDLAENIIHLVLAKTPGAPDSSKGISLFVVPKFIVNEDGS 242
           P  DG++ + GTKIFI+ GEHD+AENI+HLVLA+  GAP+  KGISLFVVPKF+VN+DGS
Sbjct: 181 PQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVNKDGS 240

Query: 243 LGDRNAVSCGSLEHKMGIHGNATCVMNY---DGAKGWLVGEENKGLAAMFIMMNAARLGV 299
           LG+RN V C S+EHKMGI  + T V+ Y    GA G+LVG+EN+GL  MFIMMN+AR  V
Sbjct: 241 LGERNDVHCVSIEHKMGIKASPTAVLQYGDHGGAVGYLVGQENRGLEYMFIMMNSARYAV 300

Query: 300 GLQGLGQGEIAFQNAVHYAKDRRQGRALTGPKEPEEKADTLFVHPDVRRMLMEGKALTEG 359
           G+QG+   E A+Q+AV YAKDR Q R + G       +  +  HPDV+RMLM  +A TEG
Sbjct: 301 GMQGIAIAERAYQHAVAYAKDRVQSRPVDG---SINASAPIIHHPDVKRMLMTMRAYTEG 357

Query: 360 LRALILWGALQHDLSHSAATEEERQAADDLLQLLTPVIKGYGTDKGFDVAVSSQQVFGGH 419
            RA+    A  +D +H     + R+      + + P++KGY T+   +V     QV GG 
Sbjct: 358 CRAMASVAAAAYDAAHHHPDADARKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGM 417

Query: 420 GYIWENGVEQYVRDARIAQIYEGTNGVQAMDLVGRKLPMNGGRALQAF-LKILATEIAEA 478
           G+I E G  QY RDA+I  IYEGT  +QA DLVGRK   +GG+  +A   +I  TE   A
Sbjct: 418 GFIEETGAAQYYRDAKILTIYEGTTAIQANDLVGRKTARDGGQTAKAIAAQIEKTEAELA 477

Query: 479 KG-NEKLASFADALEKAKGQLEAATMWLMQNAMKNPDNAGAGAHHYMHILGIVATGLMWL 537
           K  N   A+    L  A+        ++      +P+   AG+  Y+ + G +  G    
Sbjct: 478 KSDNPAAAAVLKRLTAARLAFIDVVDFVAGQTKASPNAVFAGSVPYLMLAGNLVAGWQLA 537

Query: 538 RMAKAATGLLDAGEGDAGFLEAKLVTARFFAERIMPDAGSLRRKIEGGADTLMALDPDMF 597
           R    A  L  +   D  F+ AK+ TARF+AE I+     +R  I  GA+++ AL  D F
Sbjct: 538 RSLIIAQDLA-SRSFDTDFMLAKVATARFYAEHILNKVPGIRDSIVDGAESVTALALDAF 596