Pairwise Alignments

Query, 600 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Sphingobium sp. HT1-2

Subject, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  514 bits (1324), Expect = e-150
 Identities = 273/595 (45%), Positives = 371/595 (62%), Gaps = 7/595 (1%)

Query: 3   SYNAPVRDTRFVLDHVVGLERYANLPGFENATPDLVEAILTEGGKIASEVLFPINAVGDK 62
           +Y AP+RD RFVL  +  L  +    G E    D ++ IL E  +   +++ P+N   D+
Sbjct: 2   NYQAPLRDMRFVLHELFDLSGHCQQLGIE-LDRDTLDGILEEAARFTGQIIAPLNRNSDE 60

Query: 63  EGCTRHADGSVTTPTGFKAAYDQFVEGGWTTLHAPTEFGGQGLPNVVATAVTEYVLSANQ 122
           +GC +   G VTTP G + AY Q+VE GW ++  P  +GGQGLP + + +  E +++A+ 
Sbjct: 61  QGC-QWVGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAASL 119

Query: 123 AFEMYHGLTAGAIAALIAKGSDEQKATYLPNMVSGVWTGTMNLTEPHSGTDLGLIKTKAV 182
           +F +Y GLT GA+ AL   GS+  K  YL  MVSG W GTM LTEP +GTDL L++T+A 
Sbjct: 120 SFRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRAQ 179

Query: 183 PNGDGSFAISGTKIFISAGEHDLAENIIHLVLAKTPGAPDSSKGISLFVVPKFIVNEDGS 242
           P  DGS+ I+G+KIFIS GE DL +NI+HLVLA+ P AP   +GISLF+VPK +      
Sbjct: 180 PEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPG---- 235

Query: 243 LGDRNAVSCGSLEHKMGIHGNATCVMNYDGAKGWLVGEENKGLAAMFIMMNAARLGVGLQ 302
            G+RNA+ CG+LEHKMGI G +TCVMN+DGA+GWLVGE N+GLA MF MMN AR  VGLQ
Sbjct: 236 -GERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACMFTMMNDARFQVGLQ 294

Query: 303 GLGQGEIAFQNAVHYAKDRRQGRALTGPKEPEEKADTLFVHPDVRRMLMEGKALTEGLRA 362
           GLG  E AFQ  + YA++R Q R+L GP   E+ AD + VHPDVRRML+  K LTEG R 
Sbjct: 295 GLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCRM 354

Query: 363 LILWGALQHDLSHSAATEEERQAADDLLQLLTPVIKGYGTDKGFDVAVSSQQVFGGHGYI 422
           L ++ A Q DL H+A +   RQAA     LL P++K + TD G +VA    QV+GGHGYI
Sbjct: 355 LGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGYI 414

Query: 423 WENGVEQYVRDARIAQIYEGTNGVQAMDLVGRKLPMNGGRALQAFLKILATEIAEAKGNE 482
            E G+EQ +RD+RI Q+YEGTNG+QA+DL+ RK+  +GG  L   +  +A  +  A    
Sbjct: 415 REWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANALG 474

Query: 483 KLASFADALEKAKGQLEAATMWLMQNAMKNPDNAGAGAHHYMHILGIVATGLMWLRMAKA 542
            L + A  + +   +  A +  +++   ++P  +GA +  ++     V    MWL+ A  
Sbjct: 475 GLQAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLAAMWLQAAVR 534

Query: 543 ATGLLDAGEGDAGFLEAKLVTARFFAERIMPDAGSLRRKIEGGADTLMALDPDMF 597
           A   L  G  +  F  AKL  A F+  RI+P A + R  + GGAD LMAL    F
Sbjct: 535 AQATLATGSAETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMALPASDF 589