Pairwise Alignments

Query, 905 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  260 bits (665), Expect = 1e-73
 Identities = 179/531 (33%), Positives = 266/531 (50%), Gaps = 52/531 (9%)

Query: 237 VYRFANSFYEDWVGKPPSEVIGRHVRDVVGEKTYV-ARL-PLIERAMAGEWVVADTTMPH 294
           + R A   +E + G  P   +G +V   + ++  +  RL P+  R +AGE  + DT    
Sbjct: 60  INRTARETFERYRGFVPQ--VGDYVPQFLTDQPDIMGRLAPIWPRILAGEAFI-DTVTFG 116

Query: 295 RSGEDRAAEVRYIPRIEADGSVAGFHVLVFDIEDRVRREAALERQVQHRERAEEQLRHLN 354
                R  E+RY P ++A   + G ++  +DI  RV  +  L+                 
Sbjct: 117 LDDAPRHYEIRYHPWLDAQQRIQGGYLFAYDITQRVTEQERLQ----------------- 159

Query: 355 ETLETRVVEEMAERRQAEAILAQSQKMETIGQLTGGVAHDFNNLLQVVSGNLQLLARDIA 414
                          QAE  L Q+QKME +GQLTGG+AHDFNNLL  + G L+L  + + 
Sbjct: 160 ---------------QAEEALRQAQKMEAVGQLTGGIAHDFNNLLASILGALELAGQRLV 204

Query: 415 GNEKAETRVANAMA--GVTRGAKLAAQLLAFGRRQALEPKVVNVTRFVRDMDDMLRRAIG 472
               A+T     ++     R A L  +LLAF R+Q L P+ V+V + V  M D++  + G
Sbjct: 205 QQRLADTTQLLELSRHNAQRAAALVQRLLAFSRQQTLVPQRVDVQQLVAGMHDLISSSTG 264

Query: 473 EGIEVETIVGGGLWNTFVDPAQVENALLNLAINARDAMEGQGKLTIELGNASLDDEYARS 532
             ++       GLW   +D  Q+ENALLNL INARDAM   G L+I   N  +    AR 
Sbjct: 265 PYVDYHDQTHAGLWPIRIDAQQLENALLNLCINARDAMPLGGTLSIGCANVEVQGAEARQ 324

Query: 533 HSEVAPGQYVMLAVTDTGSGIPPEIIEKVFDPFFSTKSEGKGSGLGLSMVYGFVKQSGGH 592
              +A G+++ + V DTG G+   ++++  +PFF+TK  G+G+GLGLSMVYGFV+QSGG 
Sbjct: 325 LG-LAAGRFLRIRVEDTGMGMSKAVMQRALEPFFTTKPLGQGTGLGLSMVYGFVRQSGGQ 383

Query: 593 VKIYSEVGEGTTIKLYFPRSVENEDLEVELDSGPIRGGSET---------VLVVEDDDAV 643
           + I S +G+GT I LY P    +E +     S  + G +           V++VED+ A+
Sbjct: 384 LVIDSTLGQGTAINLYLPC---DESIAAASPSPHVEGPAPAASLQQRVCKVMLVEDEPAL 440

Query: 644 RATVVEMLNDLGYGVLKAVDASSALSVIESGIQIDMLFTDVVMPGRLKSAELARMARERQ 703
           R  ++E+L D G+ V    D   A   ++     D+L TDV +PG +   +LA   R   
Sbjct: 441 RLVMLEVLLDQGHEVQAFEDGRQAYKALQEAPAPDLLITDVGLPGGIDGYQLADACRGIA 500

Query: 704 PDIAVLFTSGYTENSIVHGGRLDAGVELLSKPYSRDALARKFRHVLANQRQ 754
           P  AVL  +GY         R     ELL+KP+   ALA+    +L +  Q
Sbjct: 501 PHAAVLLITGYDLAHSTAKARPHRRTELLAKPFDLQALAQALERLLGSTAQ 551



 Score = 56.2 bits (134), Expect = 5e-12
 Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 5/124 (4%)

Query: 766 APDDKPERRNALALIVEDDAIILANTAELVKDLGLTVIEALSAEDAVSALQTTHV-DVLI 824
           AP    ++R    ++VED+  +     E++ D G  V        A  ALQ     D+LI
Sbjct: 419 APAASLQQRVCKVMLVEDEPALRLVMLEVLLDQGHEVQAFEDGRQAYKALQEAPAPDLLI 478

Query: 825 TDANLPG-MTGPDLAAIARQMLPHIGIIFATG-DTQLDYDRSAP--KTVLLAKPYDGKAL 880
           TD  LPG + G  LA   R + PH  ++  TG D      ++ P  +T LLAKP+D +AL
Sbjct: 479 TDVGLPGGIDGYQLADACRGIAPHAAVLLITGYDLAHSTAKARPHRRTELLAKPFDLQAL 538

Query: 881 SQAI 884
           +QA+
Sbjct: 539 AQAL 542