Pairwise Alignments

Query, 242 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  174 bits (441), Expect = 1e-48
 Identities = 102/233 (43%), Positives = 136/233 (58%), Gaps = 6/233 (2%)

Query: 11  SVIVVDDDADIRGLIVDQLRQENYDLLSASNLAELRQALRDQPVDLIVLDLNLPDGDGLS 70
           S+++VDDD +IR L+   L +  + + + ++    R AL   P DL++LD+ LPD DG S
Sbjct: 7   SILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFS 66

Query: 71  LCRELRAEG--SGIQIIMVTARGSAIDRVLGLELGADDYLTKPFEPRELLVRIRNLLRRP 128
           LCR +R     + + IIM+TA     DRV+GLELGADDYL KPF PREL  RI+ LLRR 
Sbjct: 67  LCRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRT 126

Query: 129 RVEAPAPADQSRYAVFGPWRLDLLQRRLIAPDDRLVMLSSAEFRLLSRFIEEPNVVLARE 188
                AP   +    F  WRLD +  RL   D   V+LS A+F LL  F++ P  +L R+
Sbjct: 127 EFGQTAPG--NAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILDRD 184

Query: 189 TL--LPERRATAAFDRTIDLQVSRLRQKLAGATGGADLILTVRGEGYVLASPV 239
           T+      R     DR +D+ VSRLRQ+L        LI TVRG GY+LA+ V
Sbjct: 185 TIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYLLAAHV 237