Pairwise Alignments

Query, 349 a.a., Transcriptional regulator, AraC family from Sphingobium sp. HT1-2

Subject, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 88/338 (26%), Positives = 142/338 (42%), Gaps = 16/338 (4%)

Query: 21  GQMRAANLRGFSDYVRARGGAPRRILAQHGLDPMVLADPDSHIACQQVAAMFEYCSLLFD 80
           G++    ++  S+ +R  G  P  +L ++GLD   L++  + ++  +   M      +  
Sbjct: 9   GELSVGFVQPLSEALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMSG 68

Query: 81  DPLFGLHLAATQDADIFGSVTAVCRAAPDLRAAIASLIRYLPV-AHSPEAQLELVEDGGM 139
           +   GL +         G        AP L  A  +L+R+ P+ A +        ED   
Sbjct: 69  EAALGLRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRFEPLYAANYRGHSRFEEDAQG 128

Query: 140 AELRWVVGADLGFNDQANYQAMMLI---LLLLRTVSGQRFRAAWVQFSADPSPRELIEIE 196
           A LR+   +   +ND   +    L+   L  L  ++G   +A  ++     +P      +
Sbjct: 129 AWLRFYSISP--YNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEF-AAPSYAARYQ 185

Query: 197 ALLGTTVRPRAPGSAIGFSAALLDLPI-----ATANRLTYRLVGGYLGRLRLFNHADMAE 251
            L  T V+  A G+ +  S A L L       +T   L        L R R+     + E
Sbjct: 186 PLCSTPVQFAADGNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRV---RSLGE 242

Query: 252 RARSYVRGALPAGTCA-IERCADRMGLSVRTLQSRLAAHDLHFSDLVEEQREQLARIYLR 310
           R    +   L  G    +E  A  + L   TL+ +LA     F DL+ E R  LA  Y+R
Sbjct: 243 RITHLLGPLLNGGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAETYIR 302

Query: 311 QTPMPIDEVAERLGYAEQTSFGRAFKRWTGQTPRQFRQ 348
            T +   E+A  LG+A   +F RAFKRWTG TP +FR+
Sbjct: 303 DTALAFGEIAYLLGFASAEAFQRAFKRWTGLTPGEFRR 340