Pairwise Alignments

Query, 277 a.a., Transcriptional regulator, IclR family from Sphingobium sp. HT1-2

Subject, 291 a.a., transcription regulatory protein (pca regulon) from Pseudomonas putida KT2440

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 71/273 (26%), Positives = 115/273 (42%), Gaps = 19/273 (6%)

Query: 11  PSTVRKVAKAVQESKAP-----AIARAAAILRLLGKSDRPLGVQAIAKELGLVPSTCLYV 65
           P  V   AK +Q          ++AR  A+++   +  R L +  I+    +  +     
Sbjct: 25  PPIVASPAKRIQAFTGDPDFMTSLARGLAVIQAFQERKRHLTIAQISHRTEIPRAAVRRC 84

Query: 66  LRALVEEELVAFDPDTKRYALQAGVLTLARNWLRRDAFNDLAQPVLDRLAQRFGLTMLGV 125
           L  L++  L     D + Y+L   VLTL   +L        AQP LDR++ +        
Sbjct: 85  LHTLIK--LGYATTDGRTYSLLPKVLTLGHAYLSSTPLAISAQPYLDRISDQLHEAANMA 142

Query: 126 QAVGLDHMIVVAMAQSGSGFQLSAQVGSRFPALISATGRCI-AAFGDYSEKE------LK 178
              G D + +   A       +   VG R PA  ++ GR + AA  D S +E      LK
Sbjct: 143 TLEGDDILYIARSATVERLISVDLSVGGRLPAYCTSMGRILLAAMDDTSLREYLERADLK 202

Query: 179 ARFDTLRWDDPPPFADWMEQLRQTRAQGFAVDEGQYIAGVTVVSAPVWKGAGRPVHAL-V 237
           AR      D    FA     ++Q RAQG+ V + +   G+  ++ PV+  +G+ + AL V
Sbjct: 203 ARTSRTLNDPESLFAC----IQQVRAQGWCVVDQELEQGLRSIAVPVYDASGQVLAALNV 258

Query: 238 AIGIGAALQREGLGALQQALVEAADALSNQLSG 270
           +  +G   + E        L+ A+  L +QL G
Sbjct: 259 STHVGRVTRSELEQRFLPILLAASRDLCHQLFG 291