Pairwise Alignments

Query, 526 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

Subject, 566 a.a., AMP-dependent synthetase from Pseudomonas simiae WCS417

 Score =  213 bits (543), Expect = 1e-59
 Identities = 158/495 (31%), Positives = 243/495 (49%), Gaps = 43/495 (8%)

Query: 61  DDGGRDEILSFDAIAAGAARFAHWLDAEGIQPGERIAFMLEPSLPFYVCLFGAMQTGAIS 120
           ++ G ++  SF  +AA + + A+ L A G+  G+R+  ML   +  +  +  A + GA+ 
Sbjct: 57  EEDGSEQRYSFQQLAARSNQVANHLRALGVNRGDRVLLMLGNDVALWDTMLAAFKLGAVV 116

Query: 121 VPLFTLFGPDALRLRVDDCKPT-ILITNAEKAELARSMDGPRVIVADDALLADLARFPAS 179
           +P   L  PD LR R++  +   +++  A   + A    G   I    A    +A   A 
Sbjct: 117 IPATALLNPDDLRDRIERGQVRHVVVGEAHVHKFAGLAQGCSRICVGSAPAGWVAHNAAF 176

Query: 180 YSP-------KTKANDLAVFQYTSGTTRELPEAVKHSHRALVTLMFAALYGTGIRPGDEF 232
             P       +T A D  +  +TSGTT + P+ V HSH++      + +Y  G++PGD  
Sbjct: 177 EYPEQFEAQGRTLATDPMLLYFTSGTTSK-PKMVLHSHQSYPVGHLSTMYWIGLQPGDLH 235

Query: 233 FCPSSPAWGHGLWHGTLAPLGLGVTTGTF-AGRFDPVRLMQALSDHKITNMSAAATHYRM 291
              SSP W    W    AP   G         RF    L+ AL  + +T++ A  T +RM
Sbjct: 236 LNISSPGWAKHAWSCLFAPWNAGACIFIHNVARFSAPALLSALERYGVTSLCAPPTVWRM 295

Query: 292 MKNSGRAADFAFHFDKLSY-----TGEPIDPATLEFIDAHFKVSACSMYGTTEIGVVLVN 346
           +       D A +  +LS       GEP++P  +E I   + +     +G +E   ++ N
Sbjct: 296 LIQE----DLASYRPRLSLRELVGAGEPLNPEIIEQIQQAWGLPLRDGFGQSETTALVGN 351

Query: 347 YPGAQDFRVKPGSLGKAVPGQRLEVQRPDGSACDPGEIG--------ELMLW-------- 390
            PG     +KPGS+G+ +PG ++ +  PDG   + GE+          LML         
Sbjct: 352 TPGQL---LKPGSMGRPLPGYQVALLDPDGIPGNEGEVALPLDVRPLGLMLCYEDSPEKT 408

Query: 391 ---RRDRWETTKDRAKIDADGYFYHCGRADDVIISAGWTMSAVEIENTLLKHEAVLECAV 447
               RD +  T D A+IDADGY    GRADDV  ++ + +S  E+E+ L++H AV+E AV
Sbjct: 409 AEVMRDGYYRTGDTAQIDADGYITFVGRADDVFKASDYRISPFELESALIEHPAVMEVAV 468

Query: 448 IGVPDDKRGQVVKAFIILNRD--GSDALVRELQDFTREKLAQHEFPRIVEFVTDLPKTPA 505
           +  PD  R  V KAF+IL  D  GS AL + +  F RE LA ++  R +EFVT+LPKT +
Sbjct: 469 VPSPDPLRLAVPKAFLILAHDEPGSAALAQHILAFAREHLAPYKRVRRIEFVTELPKTIS 528

Query: 506 GKVHRKILRDREAAK 520
           GK+ R  LR  E  +
Sbjct: 529 GKIRRVELRQMEVLR 543