Pairwise Alignments

Query, 441 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 396 a.a., Rieske 2Fe-2S family protein from Pseudomonas putida KT2440

 Score = 84.3 bits (207), Expect = 6e-21
 Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 14/209 (6%)

Query: 16  NAAYVSQSYADAEAAKLWPKVWQVACREEEIPEVGDYVTYDIVDDSIIVVRAAPDRIAAY 75
           N  Y  Q Y + E  ++  + W       ++P        D +   ++++R     +  +
Sbjct: 30  NEFYTDQRYFELERDEVLGRNWACIGFASDLPTNSYVKPVDFMGLPLLMMRNREGLVQVF 89

Query: 76  FNVCRHRGRQLTEGCGNAKRLV-CPFHAWSWDLDGN-----NVGVVRKEAWGDCLKADDL 129
            NVC HRG +L +  G  + ++ CP+H+W++DL+G      ++G + +    +    +  
Sbjct: 90  HNVCSHRGVKLVQQAGEVQGVIRCPYHSWTYDLNGGLKGTPHIGGINQHK-DERFACEKH 148

Query: 130 RLRDVRVDSWGGWLFVCMDPDAPPLRDYLEPAASMLDPFE-------LEQMRYRWRQWLH 182
            L+ +R   W   +F+ +  +AP L + L+P       F        L +        + 
Sbjct: 149 GLKALRTTIWMDMVFINLSGEAPALEEQLQPLTERWTQFLGNDGMSLLRREANGGAMSIE 208

Query: 183 FPCNWKVAIEAFNEGYHVAGTHPQLTRYS 211
             CNWK+A+E + E YH+   HP L  YS
Sbjct: 209 VNCNWKLAVENYCEAYHLPWVHPSLNSYS 237



 Score = 28.5 bits (62), Expect = 4e-04
 Identities = 16/49 (32%), Positives = 24/49 (48%)

Query: 384 SWRKVLCQDFSNMGAVQRGLRSRGCDGLRPSPVEERAIINFHRVLADYL 432
           SWR V  +D +++  +Q+G  S G  G   SP  +     FH+  A  L
Sbjct: 341 SWRVVFAEDIASVEGMQKGRSSPGYSGGAFSPEMDLPTHYFHKWAARQL 389