Pairwise Alignments

Query, 385 a.a., CzcABC family efflux RND transporter, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 371 a.a., macrolide transporter membrane fusion protein (MFP) component from Escherichia coli BL21

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 85/358 (23%), Positives = 150/358 (41%), Gaps = 49/358 (13%)

Query: 49  GKITLSADQIASAGIQTARPMMGGSGTIELPATIDG--DPQGTQVVSAAIGGRVVSLTRN 106
           G ITL   +I +A + T + ++   G ++      G  D      V A + G++ +L+  
Sbjct: 21  GLITLW--RILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVA 78

Query: 107 LGQSIGRGQTLAVIESREAAS-----------LNAETEAARARLSLANSNLAREQRLFSQ 155
           +G  + + Q L VI+  +A +           L A+ + A A L LA    +R+QRL   
Sbjct: 79  IGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQT 138

Query: 156 RVSPEQDLIAART--AATEARIALRLAQ--QQVSAAGTGGGGLNRIGIVAPMSGQVIGRS 211
           +   +QDL  A T  A  +A+I    AQ  +  ++  T    L+   IVAPM+G+V   +
Sbjct: 139 KAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQIT 198

Query: 212 VVLGQTVAADAE---LFRVANLSSVSLSLNLQPQDAGRVRPGATVNIKAAGRQATAKVTF 268
            + GQTV A  +   +  +A++S++ +   +   D   ++PG        G   T     
Sbjct: 199 TLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQ 258

Query: 269 VSPALDANTRLVPVI-----ATLDNRDGLWRVGEPVTASVALTGSGGDGAIRVPLTAV-- 321
           +   L    ++   I       + N +GL R+   +TA V +  +     + +PL+A+  
Sbjct: 259 IKDVLPTPEKVNDAIFYYARFEVPNPNGLLRL--DMTAQVHIQLTDVKNVLTIPLSALGD 316

Query: 322 ---------------QTEEGRSVVFVRTKTGFQATAVQLGDSAGDSVIIKSGLKGTEE 364
                          +T E    +  R  T  +   +  G  AGD V+I     G  +
Sbjct: 317 PVGDNRYKVKLLRNGETREREVTIGARNDTDVE---IVKGLEAGDEVVIGEAKPGAAQ 371