Pairwise Alignments

Query, 420 a.a., CzcABC family efflux RND transporter, outer membrane protein from Sphingobium sp. HT1-2

Subject, 501 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Sphingobium sp. HT1-2

 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 94/392 (23%), Positives = 161/392 (41%), Gaps = 42/392 (10%)

Query: 35  LDQAVAAAGGSAPAAEAAQANVEAARAARTVAGLRPNPTVQTQVENIAGSGPYR------ 88
           L + VA A  +      A A V  AR A  + G    P +        G   Y       
Sbjct: 83  LRRLVAQALANNRDIRIAAARVAQARGAWRIEGASLYPQLDAVATGTRGQAFYSLPVIGD 142

Query: 89  ---GVGSAESTVSMAVPIELGG-----KRSARIA-VANAQTDKALLVSAITQADIRLQIT 139
               V S  + +S +  I+  G     K +AR   +A+ ++ +A+    I Q  +   + 
Sbjct: 143 QIVDVKSITAQLSASWEIDFWGRLRNLKEAAREQFLASEESRRAVATDLIAQVALGYLLE 202

Query: 140 QLYIEAAA-AERRVQTARDQARIAGDAANAASVRVKAGRASPIEEQRANVAKINADAELV 198
           + Y E AA  ++ + T ++  RI          R + G  S ++  ++ V    AD  + 
Sbjct: 203 REYEERAALTQQSIITRQETLRIMRR-------RYEVGSGSKLDLAQSQVLLAQADTTM- 254

Query: 199 RTIRLAQASRAN-LERRIGQPMGGPLDTAWLERLPRGYGPEVPPSAVGTLA-----LAAA 252
             + L +A   N L   +GQP+   +    L     G   +VP      L      + AA
Sbjct: 255 HVLNLDRAVNRNALALLVGQPV--EIAPGSLRLAGPGGDYQVPAGLPSELLTNRPDIVAA 312

Query: 253 DADLAVADANVRLANSQRVPNLE-------AGPGLRRLSATNDTALIFTVTMPIPIFNSG 305
           +  L  A+AN+  A +   PN+          P L  L   N     F+ T+ +P+FN+G
Sbjct: 313 EHQLRAANANIGAARAAFFPNISLTGAYGTTSPDLDGLFGGNSEVWSFSPTIRLPLFNAG 372

Query: 306 --KAAVAQARAQRNQVEAQKRMTALDVEQAITDAQTSASNAAVTAQTATGPALEAAQEAA 363
             K  +  A+A+R++  A    T     + ++DA       A+   T T   ++A +E A
Sbjct: 373 RLKGNLDVAQARRDEAVATYEKTIQSAFRDVSDALVRRRQIALQIGT-TRQLVDAQRERA 431

Query: 364 RIARIGYREGKFGQLDLLDAERTLAQTRLAAI 395
           R+A++ +  G+   L++LDA+R L     A +
Sbjct: 432 RLAQLRFDNGRSTYLEVLDAQRDLFDAEQALV 463