Pairwise Alignments

Query, 420 a.a., CzcABC family efflux RND transporter, outer membrane protein from Sphingobium sp. HT1-2

Subject, 417 a.a., metal RND efflux outer membrane protein, CzcC family from Pseudomonas putida KT2440

 Score = 84.0 bits (206), Expect = 8e-21
 Identities = 101/415 (24%), Positives = 166/415 (40%), Gaps = 39/415 (9%)

Query: 15  VAVAQAQEMPAAVAGASPYTLDQAVAAAGGSAPAAEAAQANVEAARAARTVAGLRPNPTV 74
           +A A    +PA  A A+  TLD A+  A  +AP+ +A Q    AAR +   AG  P+P +
Sbjct: 12  LAAALVLLLPALSAQANSLTLDDALQLAERNAPSLQARQEQASAARHSVVPAGELPDPRL 71

Query: 75  QTQVENIAGSGPYRGVGSAE----STVSMAVPIELGGKRSARIAVANAQTDKALLVSAIT 130
              V+N+   G  R   + +      V ++  +    KR AR+  A A  ++A   +   
Sbjct: 72  NLGVQNLPVDGSDRWSTNRDFMTMQVVGLSQEVPNRDKRKARVETAQATVERADAEALFE 131

Query: 131 QADIRLQITQLYIEAAAAERRVQ------------TARDQARIAGDAANAASVRVKAGRA 178
           +  +R    Q +I A   +R++Q             A  +AR+A     +A        A
Sbjct: 132 RLKVRAATAQAWITAYTLQRKLQQFDMLFNENRLLAAAVRARLAAGGGASADALAPGQEA 191

Query: 179 SPIEEQRANVAKINADAELVRTIRLAQASRANLERRIGQPMG--GPLDTAWLERLPRGYG 236
           + +EEQ+  +            +  A  +RA L+R IGQ      P    W  R      
Sbjct: 192 AQLEEQKDQL------------LTQATQARAALKRWIGQDADAQAPAFPQWPVR-----A 234

Query: 237 PEVPPSAVGTLALAAADADLAVADANVRLANSQRVPNLEAGPGLRRLSATNDTALIFTVT 296
           P+   +      LAA  A    A A V+ A +++  +       +R        +   V+
Sbjct: 235 PDYLHTLHAHPELAAYGAMTREAQAQVQQAIAEKKSDWGWQVDYQRRGPEFSNMVSVQVS 294

Query: 297 MPIPIFNSGK--AAVAQARAQRNQVEAQKRMTALDVEQAITDAQTSASNAAVTAQT-ATG 353
             +P+F+  +    +A  RAQ  Q+E ++   AL    A  +A  +       A T +  
Sbjct: 295 FQLPLFSGSRQDPMIAARRAQVRQLEDEQE-AALREHTAQLEADLAEYQRLQRAVTRSRD 353

Query: 354 PALEAAQEAARIARIGYREGKFGQLDLLDAERTLAQTRLAAIDALASYQNARAQL 408
             L  A++   +A   YR GK    ++L A R   + RL  ID         A+L
Sbjct: 354 TLLPLAEQRVSLALADYRAGKSALEEVLTARRQRVEARLQDIDLQGQLAATAARL 408