Pairwise Alignments

Query, 509 a.a., ATP synthase alpha chain (EC 3.6.3.14) from Sphingobium sp. HT1-2

Subject, 457 a.a., flagellum-specific ATP synthase from Pseudomonas putida KT2440

 Score =  130 bits (327), Expect = 1e-34
 Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 17/377 (4%)

Query: 59  VQGMALNLEADNVGIVIFGSDAEIKEGDTVKRTGTIVDVPVGKGLLGRVVDGLGNPIDGK 118
           V+   +      V ++  GS   I  G  V        +P+G  +LGRV+DG G  +DGK
Sbjct: 71  VEAEVMGFAGPKVFLMPVGSIVGIAPGARVVPLDDGGRLPMGMSMLGRVLDGAGRALDGK 130

Query: 119 GPIEYTERKRVEVKAPGIIPRKSVHEPVQTGLKAIDALVPVGRGQRELIIGDRQTGKTAV 178
           G ++  +   ++      + R  + +P+  G+++I+ L+ VGRGQR  +      GK+ +
Sbjct: 131 GGMKAEDWVPMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVL 190

Query: 179 AIDTFINQKGINAGDDESKKLYCIYVAVGQKRSTVAQIVKQLEENGAMEYSIVVAATASE 238
                    G+     E++ +  +   +G++   V + ++ +     ++ S+VVA+ A +
Sbjct: 191 L--------GMMTRFTEAEII--VVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADD 240

Query: 239 PAPLQYLAPYTGVTMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV 298
              ++  A      + E+FRD G + +++ D L++ A A R+++L +  PP    YP  V
Sbjct: 241 APLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSV 300

Query: 299 FYLHSRLLERAAKMNDANGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETNLFY 358
           F    +L+ERA   N   G GS+TA   + ++  D    I  +   + DG   L   L  
Sbjct: 301 FAKLPKLVERAG--NGEPGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAE 358

Query: 359 QGIRPAINVGLSVSR----VGSAAQTKAMKKVSGSIKLELAQYREMAAFAQFGSDLDAST 414
           +G  PAI++  S+SR    V  A   +  +K    +   L+Q R++ +   + +  D  T
Sbjct: 359 EGHYPAIDIEASISRVMPQVVDADHLRQAQKFK-QLWSRLSQSRDLISVGAYVAGGDPET 417

Query: 415 QKLLNRGARLTELLKQG 431
              +   ++L E L+QG
Sbjct: 418 DLAIALQSKLVEFLRQG 434