Pairwise Alignments

Query, 483 a.a., Na+-driven multidrug efflux pump from Sphingobium sp. HT1-2

Subject, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

 Score = 96.7 bits (239), Expect = 2e-24
 Identities = 118/463 (25%), Positives = 194/463 (41%), Gaps = 50/463 (10%)

Query: 20  LLTFAIPTLASNILQSLNGSINAIWVGRFLGPQALAA----TANANIIMFLMFSVVFGFG 75
           LL  A P +AS +   L    + + + R + PQALA      A+ + +      V+   G
Sbjct: 12  LLRLAGPLIASQLAHMLMVLTDTLMMAR-ISPQALAGGGLGAASYSFVSIFCLGVIAAVG 70

Query: 76  MASTVMIAQAVGARDMDAARRAFGSAVGFCFLLAMGVAVAGWFGGPALLHLLATPPEAFD 135
                ++A   GA D++ A R   + +   + LA+  A+  W   P LL L    PE   
Sbjct: 71  ----TLVAIRKGANDIEGATRLAQNGLWLAWALALFAALVLWNLEPVLL-LFGQKPENVA 125

Query: 136 MALTYLRVIFVAMPASLLSVMMMMGLRGTGDARTP-LIFMILSVAIDLVLNPVLILGLGP 194
            A  +L ++ +A+P   L+ M + G        TP ++  +    ++ + N  LI G+  
Sbjct: 126 SAAEFLTLLPLALPG-YLTFMALRGFTSALGRSTPVMVISLFGTVLNYLFNVALIEGMFG 184

Query: 195 IPAMGIGGSAAATA--AAGFVSLIALVIYTYAKDLPLRLRGAELGYLRPAMDEMRVLSTK 252
           +P +G+ G    TA  + G  + +AL I  +       LR    G  RP++  +R L   
Sbjct: 185 LPKLGLMGIGLVTAVVSMGMATALALYIRWHPAYTAYPLR---KGLSRPSLAALRELWRL 241

Query: 253 GLPMGLQMIV---MSTSGLVMIGLVNREGFLVTAAYGAAQQIWTYLQMPAMAMGAAVSAM 309
           GLP+G   +V   +     + +G++   G    AA+  A QI +   M    +  AV+  
Sbjct: 242 GLPIGGTYMVEVGLFAFAALCMGVL---GSTELAAHQIALQIVSTAFMVPTGLSYAVTMR 298

Query: 310 AAQNIGAGRWDRISRITGYGISYLLAITGAMVVVILIFHEALLALFLSHNQ----AVIDA 365
                GAG           GI +   I  A   + L+  EAL+ LF+  N     A+   
Sbjct: 299 VGLYYGAGNLLAARSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAIFQV 358

Query: 366 AWNMQLLASWSFMLFGCTMILFGVMRANGVVVAPLLILVFTLFAVRLGFYYLAYPRIGAD 425
           A  + ++A+W  +  G   I  G +R         L    T F + L  Y+L    +GA 
Sbjct: 359 AVQLLMVAAWFELFDGMQTIAMGSIRG--------LKDAKTTFLIGLVCYWL----VGAP 406

Query: 426 ALWL-SFPVGS---------AVSLTLAALVYWQG-GWRKAKLM 457
           + WL +F +G          A+ L  AA+    G  WR  +L+
Sbjct: 407 SAWLFTFTLGGGAVGIWWGLALGLACAAVALTFGFEWRMKRLL 449