Pairwise Alignments

Query, 480 a.a., Type I secretion outer membrane protein, TolC family from Sphingobium sp. HT1-2

Subject, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 84/324 (25%), Positives = 150/324 (46%), Gaps = 18/324 (5%)

Query: 109 GTVRNSVKAAETRVESGQANLRGTEASVFSQTVAAYMDVIRDIALVSLNAANVKVLEVNL 168
           G +R ++ A E   E+  A+L     S  S+ V  Y+ +        L  A V   E +L
Sbjct: 167 GKLRETLNANEASAEASFADLASIRLSQQSELVQNYLQLRVIDEQKRLLEATVAAYERSL 226

Query: 169 QATNDRFEVGDVTRTDVAQSESRLELARSDLQRAESNLITSR---ENYIA-MVGEAPVD- 223
           +   +++  G      VAQ+ ++L+  ++DL     +LI  R   EN IA ++G+AP D 
Sbjct: 227 RMNENQYRAGVAGPDAVAQARTQLKSTQADL----IDLIWQRAQFENAIAVLLGKAPADF 282

Query: 224 -LESPPALPGLPADPDSAVRVALADNPDILAAQKSREAARYDVKAAKGATLPTLS----- 277
            L    A+P LP  P S     L   PDI AA+++  AA  ++  ++ A  P LS     
Sbjct: 283 ALADSKAIPALPQIPVSLPSQLLERRPDIAAAERNVMAANANIGVSRAAYFPDLSLSMSG 342

Query: 278 GFSQGSYTDYMDKDIAANKQAAVGATLTIPFYQGGRPAAQVRQNQALESQAIERQIEVER 337
           G+S  S++++++     N+  +VG  L +  +  G+ +A+V +  A+  Q + +  +   
Sbjct: 343 GYSSSSFSNWIE---LPNRYWSVGPQLALTLFDAGKRSAEVDRTVAVYDQTVAQYRQTVL 399

Query: 338 GVISQARAAYAALQASLRTIQSSQKAVDAAELSLEGVRAENSVGSRTILDILNAEQESLN 397
               +       L+         Q+A+DAA  SL     +   G    LD++N +  +L+
Sbjct: 400 DGFREVENLLVQLKVYGDEAVVRQEALDAARESLRLTENQYRAGLIGYLDVVNVQTTALS 459

Query: 398 AKVELVTARRNAYVAGFTLLAAMG 421
            +  ++   +   VA   L+AA+G
Sbjct: 460 NERSVLNLLQGRLVASVQLVAALG 483