Pairwise Alignments

Query, 480 a.a., Type I secretion outer membrane protein, TolC family from Sphingobium sp. HT1-2

Subject, 492 a.a., type I secretion outer membrane protein, TolC family from Enterobacter asburiae PDN3

 Score =  122 bits (305), Expect = 4e-32
 Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 20/323 (6%)

Query: 133 EASVFSQTVAAYMDVIRDIALVSLNAANVKVLEVNLQATNDRFEVGDVTRTDVAQSESRL 192
           + ++   T  AY +V+  I  +S   A  + +   L  T  RF VG V  TDV  + S+ 
Sbjct: 124 QQTLILNTATAYFNVLSAIDALSYTEAQKQAIYRQLDQTTQRFNVGLVAITDVQNARSQY 183

Query: 193 ELARSDLQRAESNLITSRENYIAMVGEAPVDLESPPALPGLPADPDSAVRVALAD----N 248
           +   ++   A +NL  + E+   + G    +L S   +     D   AV   L +    N
Sbjct: 184 DTVLANEVTARNNLDNALESLRQVTGNYYPELASLN-VDSFKTDKPQAVNALLKEAENRN 242

Query: 249 PDILAAQKSREAARYDVKAAKGATLPTLS-----GFSQGSYT-------DYMDKDIAANK 296
             +L A+ S++ AR  ++ A+   LPTLS     G S  +Y+        Y D ++  NK
Sbjct: 243 LSLLQARLSQDLAREQIRQAQDGHLPTLSLSASTGVSDTTYSGSKTNTSQYDDSNMGQNK 302

Query: 297 QAAVGATLTIPFYQGGRPAAQVRQNQALESQAIERQIEVERGVISQARAAYAALQASLRT 356
              VG + ++P YQGG+  +QV+Q Q     A E+     R V+   R+++  + AS+ +
Sbjct: 303 ---VGLSFSLPLYQGGQVNSQVKQAQYNFVGASEQLESAHRNVVQTVRSSFNNVNASISS 359

Query: 357 IQSSQKAVDAAELSLEGVRAENSVGSRTILDILNAEQESLNAKVELVTARRNAYVAGFTL 416
           I + ++AV +A+ SL+ + A  SVG+RTI+D+L+A     NAK +L +AR    +    +
Sbjct: 360 INAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSSARYQYLINQLNI 419

Query: 417 LAAMGHAEADDLGLESGTLYDPM 439
             A+G     DL + +  L  P+
Sbjct: 420 KQALGTLNEQDLQMLNSALGKPV 442



 Score = 45.1 bits (105), Expect = 6e-09
 Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 8/187 (4%)

Query: 100 SIDVPIYSGGTVRNSVKAAETRVESGQANLRGTEASVFSQTVAAYMDVIRDIALVSLNAA 159
           S  +P+Y GG V + VK A+         L     +V     +++ +V   I+ ++    
Sbjct: 306 SFSLPLYQGGQVNSQVKQAQYNFVGASEQLESAHRNVVQTVRSSFNNVNASISSINAYKQ 365

Query: 160 NVKVLEVNLQATNDRFEVGDVTRTDVAQSESRLELARSDLQRAESNLITSRENYIAMVGE 219
            V   + +L A    + VG  T  DV  + + L  A+  L  A    + ++ N    +G 
Sbjct: 366 AVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSSARYQYLINQLNIKQALGT 425

Query: 220 A-PVDLESPPALPGLP--ADPDSAVRVALADNPDILAAQKSREAARYDVKAAKGATLPTL 276
               DL+   +  G P    PDS       +NP+ +AA  +   A  +  AA+ A   T 
Sbjct: 426 LNEQDLQMLNSALGKPVSTSPDSVA----PENPEQVAAVDNFN-ANSNTPAAQPAAARTT 480

Query: 277 SGFSQGS 283
           +  S+G+
Sbjct: 481 APASKGN 487



 Score = 38.9 bits (89), Expect = 4e-07
 Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 2/162 (1%)

Query: 248 NPDILAAQKSREAARYDVKAAKGATLPTLSGFSQGSYTD-YMDKDIAANKQAAVGATLTI 306
           NPD+  +   R+AA   +  A+   LP L   +  +Y++ + D +   +   +    LT 
Sbjct: 36  NPDLRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGFRDANGVNSNATSASLQLTQ 95

Query: 307 PFYQGGRPAAQVRQNQALESQAIERQIEVERGVISQARAAYAALQASLRTIQSSQKAVDA 366
             +   +  A   Q ++   Q +  Q + +  +++ A A +  L A +  +  ++    A
Sbjct: 96  TLFDMSKWRALTLQEKSAGIQDVTYQTDQQTLILNTATAYFNVLSA-IDALSYTEAQKQA 154

Query: 367 AELSLEGVRAENSVGSRTILDILNAEQESLNAKVELVTARRN 408
               L+      +VG   I D+ NA  +        VTAR N
Sbjct: 155 IYRQLDQTTQRFNVGLVAITDVQNARSQYDTVLANEVTARNN 196