Pairwise Alignments

Query, 379 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 454 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  119 bits (298), Expect = 2e-31
 Identities = 95/285 (33%), Positives = 143/285 (50%), Gaps = 27/285 (9%)

Query: 106 VDFIQKPIEADILRSKTNVFYELYRQRSEIVAQRDALASMADALQ---AADRRKNEFLAI 162
           VDF  KP+       + N+ + L  +  +I  ++ A A++  A Q   AA+R K++FLA 
Sbjct: 177 VDFSVKPVPDH----EGNILF-LVPEGRDITQRKRAEAALVAAKQEAEAANRAKSQFLAT 231

Query: 163 LGHELRNPI-AAIGAGLHLLERRAGTGVEGEIREGMNR-HI--RHVSRLVDDLLDIARID 218
           + HELR P+ A IG    +L    G        E M+  H   +H+  L++D+LD++RI+
Sbjct: 232 VSHELRTPLNAVIGFSEAILAGATGPASLERCVEYMDLIHSAGQHLRALIEDILDVSRIE 291

Query: 219 QGKISLKLERISLQDVLAFAIEASQPLIESGGHRLVRDLPDATIWLEADFSRLA------ 272
            G+  L  E     ++    + A+  L+E   H+ V    D T+ +  D  R+       
Sbjct: 292 AGRTELDEEEADPAEL----VRAAARLLE---HKAVVTGVDFTVVIAPDLPRMRLDPRRI 344

Query: 273 -QIASNLLNNAAKYTPPGGEIRLTARRKGPWAEVEVADNGIGIPPEMQEKIFDLFAQVSR 331
            Q+  NL  NA K+TP GG + ++A        + V D GIGI PE   K++  F Q   
Sbjct: 345 RQVLLNLAGNALKFTPAGGRVGISAEHVPEGLALTVEDTGIGIAPEHHAKVWQAFYQADS 404

Query: 332 PGSDRLDGLGIGLALVKQLVGLHGGTLHLERSEMGKGSVFLVRLP 376
             S R  G G+GLA+V+  V  HGGT+ L  SE GKG+   V LP
Sbjct: 405 SLSRRHQGSGLGLAIVRHFVEAHGGTVSL-ASEAGKGTRITVLLP 448